RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 NFIBO00712 420 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.69
FARP1-232ENST00000601009 DYNC1LI2O43237 492 aaPredicted RBP10.74□□□□□ -0.69
FARP1-232ENST00000601009 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
FARP1-232ENST00000601009 SMPD1P17405 629 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 CALML3P27482 149 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 CDK7P50613 346 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 DUSP28Q4G0W2 176 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 MFSD5Q6N075 450 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 EEPD1Q7L9B9 569 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 RGS22Q8NE09 1264 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 ZKSCAN3Q9BRR0 538 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 MTIF3Q9H2K0 278 aaKnown RBP10.74□□□□□ -0.69
FARP1-232ENST00000601009 POLR3EQ9NVU0 708 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 TBX21Q9UL17 535 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
FARP1-232ENST00000601009 ABCB11O95342 1321 aa10.74□□□□□ -0.69
FARP1-232ENST00000601009 DHX16O60231 1041 aaKnown RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 RPS6P62753 249 aaKnown RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 BEX3Q00994 111 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 ITGA7Q13683 1181 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 PPP2R5BQ15173 497 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 USH1GQ495M9 461 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 IFIT1BQ5T764 474 aaKnown RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 TTC22Q5TAA0 569 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 TAPT1Q6NXT6 567 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 PSRC1Q6PGN9 363 aaPredicted RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 CXCL17Q6UXB2 119 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 MCF2L2Q86YR7 1114 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 FAM126BQ8IXS8 530 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 SCFD2Q8WU76 684 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 WDR11Q9BZH6 1224 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
FARP1-232ENST00000601009 LCTP09848 1927 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 ASTN1O14525 1302 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 TNKSO95271 1327 aa10.73□□□□□ -0.69
FARP1-232ENST00000601009 MYH6P13533 1939 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 ERICH2A1L162 156 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 CTAGE5O15320 804 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 KPNA6O60684 536 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 ITGB8P26012 769 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 TRAF1Q13077 416 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 SART3Q15020 963 aaKnown RBP10.72□□□□□ -0.69
FARP1-232ENST00000601009 SLC30A10Q6XR72 485 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 ENAHQ8N8S7 591 aaPredicted RBP10.72□□□□□ -0.69
FARP1-232ENST00000601009 OR6J1Q8NGC5 347 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 PDGFCQ9NRA1 345 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
FARP1-232ENST00000601009 MRPL11Q9Y3B7 192 aaKnown RBP10.72□□□□□ -0.69
FARP1-232ENST00000601009 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
FARP1-232ENST00000601009 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.71□□□□□ -0.69
FARP1-232ENST00000601009 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.71□□□□□ -0.69
FARP1-232ENST00000601009 RBM47A0AV96 593 aaKnown RBP10.71□□□□□ -0.69
FARP1-232ENST00000601009 CD4P01730 458 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 EDNRBP24530 442 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 RALYLQ86SE5 291 aaKnown RBP10.71□□□□□ -0.69
FARP1-232ENST00000601009 FBXO11Q86XK2 927 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 ADGRF4Q8IZF3 695 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 UNC80Q8N2C7 3258 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 SLC43A3Q8NBI5 491 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
FARP1-232ENST00000601009 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 UBA5Q9GZZ9 404 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 HIPK3Q9H422 1215 aa10.71□□□□□ -0.69
FARP1-232ENST00000601009 CDH23Q9H251 3354 aa10.7□□□□□ -0.7
FARP1-232ENST00000601009 IRX5P78411 483 aaPredicted RBP10.7□□□□□ -0.7
FARP1-232ENST00000601009 RPUSD2Q8IZ73 545 aaKnown RBP10.7□□□□□ -0.7
FARP1-232ENST00000601009 GUCD1Q96NT3 240 aa10.7□□□□□ -0.7
FARP1-232ENST00000601009 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
FARP1-232ENST00000601009 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
FARP1-232ENST00000601009 MTG1Q9BT17 334 aaPredicted RBP10.7□□□□□ -0.7
FARP1-232ENST00000601009 PPP1R12CQ9BZL4 782 aa10.7□□□□□ -0.7
FARP1-232ENST00000601009 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
FARP1-232ENST00000601009 MYL3P08590 195 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 TXNP10599 105 aaKnown RBP10.69□□□□□ -0.7
FARP1-232ENST00000601009 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
FARP1-232ENST00000601009 CSF2RAP15509 400 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 EPHB4P54760 987 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 STXBP2Q15833 593 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 QRICH1Q2TAL8 776 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 RMDN3Q96TC7 470 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.69□□□□□ -0.76e-7■□□□□ 9.5
FARP1-232ENST00000601009 AMNQ9BXJ7 453 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 ALDH8A1Q9H2A2 487 aaPredicted RBP10.69□□□□□ -0.7
FARP1-232ENST00000601009 IL23AQ9NPF7 189 aa10.69□□□□□ -0.7
FARP1-232ENST00000601009 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
FARP1-232ENST00000601009 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
FARP1-232ENST00000601009 A6NJR5 290 aa10.68□□□□□ -0.7
FARP1-232ENST00000601009 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
FARP1-232ENST00000601009 B4GALT4O60513 344 aa10.68□□□□□ -0.7
FARP1-232ENST00000601009 PFKMP08237 780 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms