RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.73■□□□□ 0.11
SOX2-OT-235ENST00000600962 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
SOX2-OT-235ENST00000600962 hCG_1642624A0A1W2PR95 340 aa15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 ADD1P35611 737 aaKnown RBP15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 COL20A1Q9P218 1284 aa15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 CNPY2Q9Y2B0 182 aa15.72■□□□□ 0.11
SOX2-OT-235ENST00000600962 ASB14A6NK59 587 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 SEPT4O43236 478 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 CFBP00751 764 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 PDIA3P30101 505 aaKnown RBP15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 ALDH5A1P51649 535 aaPredicted RBP15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 HSD17B4P51659 736 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 GHRHRQ02643 423 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 MCF2L2Q86YR7 1114 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 SYTL5Q8TDW5 730 aaPredicted RBP15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 MORC4Q8TE76 937 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 MAF1Q9H063 256 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 KATNBL1Q9H079 304 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 SEC63Q9UGP8 760 aaKnown RBP15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 OGDHLQ9ULD0 1010 aa15.71■□□□□ 0.11
SOX2-OT-235ENST00000600962 TRAF1Q13077 416 aa15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 ACVR2BQ13705 512 aa15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 ANO1Q5XXA6 986 aa15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 UBE2Q1Q7Z7E8 422 aa15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 ABHD16BQ9H3Z7 469 aa15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 ADD3Q9UEY8 706 aaKnown RBP15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 ZHX1Q9UKY1 873 aaPredicted RBP15.7■□□□□ 0.1
SOX2-OT-235ENST00000600962 LCTP09848 1927 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 MSCO60682 206 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 MNX1P50219 401 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 DNERQ8NFT8 737 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 LENG1Q96BZ8 264 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 TAAR1Q96RJ0 339 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 NCOA5Q9HCD5 579 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
SOX2-OT-235ENST00000600962 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 CCDC196A0A1B0GTZ2 297 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 ADCY6O43306 1168 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 AKR1A1P14550 325 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 EDNRBP24530 442 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 HOXA13P31271 388 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 NTRK3Q16288 839 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 FBXO16Q8IX29 292 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 DIS3LQ8TF46 1054 aaKnown RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 ZNF274Q96GC6 653 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 V9GY48 417 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-235ENST00000600962 ZNFX1Q9P2E3 1918 aaKnown RBP15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 GCOM1H8Y6P7 765 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 POLR2MP0CAP2 368 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 CAPN2P17655 700 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 AK2P54819 239 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 MLLT1Q03111 559 aaPredicted RBP15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 HEATR3Q7Z4Q2 680 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 SAMD3Q8N6K7 520 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 ANKLE1Q8NAG6 615 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 KIF2CQ99661 725 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 MAP3K20Q9NYL2 800 aaKnown RBP15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 TPCN1Q9ULQ1 816 aa15.67■□□□□ 0.1
SOX2-OT-235ENST00000600962 LRRC37A2A6NM11 1700 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 RARBP10826 455 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 EIF2AK2P19525 551 aaKnown RBP15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 RBM25P49756 843 aaKnown RBP15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 NEK4P51957 841 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 PDE4DQ08499 809 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 STK3Q13188 491 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 TAPT1Q6NXT6 567 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 PHKBQ93100 1093 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 RMDN3Q96TC7 470 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 PXMP2Q9NR77 195 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 PDGFCQ9NRA1 345 aa15.66■□□□□ 0.1
SOX2-OT-235ENST00000600962 MEIS2O14770 477 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 IFNAR1P17181 557 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 ADCYAP1R1P41586 468 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 TMEM63BQ5T3F8 832 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 ARHGEF16Q5VV41 709 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 USP17L6PQ6QN14 398 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 PAWRQ96IZ0 340 aaKnown RBP15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 XPNPEP3Q9NQH7 507 aa15.65■□□□□ 0.1
SOX2-OT-235ENST00000600962 STXBP3O00186 592 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms