RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 BLZF1Q9H2G9 400 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 MAN1B1Q9UKM7 699 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 OPLAHO14841 1288 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 ORC2Q13416 577 aaPredicted RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 MTMR9Q96QG7 549 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 ZHX2Q9Y6X8 837 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 SMC2O95347 1197 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 BMP6P22004 513 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
HIF3A-218ENST00000600383 DPY19L2Q6NUT2 758 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 LPAR1Q92633 364 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 DISC1Q9NRI5 854 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
HIF3A-218ENST00000600383 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
HIF3A-218ENST00000600383 PLA2G6O60733 806 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
HIF3A-218ENST00000600383 TRAF1Q13077 416 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 GPR162Q16538 588 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 SUPT20HL1Q3ZLR7 823 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 PDXDC2PQ6P474 469 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 CABP7Q86V35 215 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 CPXCR1Q8N123 301 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
HIF3A-218ENST00000600383 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
HIF3A-218ENST00000600383 AK8Q96MA6 479 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
HIF3A-218ENST00000600383 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 ZNF112Q9UJU3 913 aa17.13■□□□□ 0.33
HIF3A-218ENST00000600383 FLOT1O75955 427 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 PTPRAP18433 802 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 USP11P51784 963 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 NT5DC1Q5TFE4 455 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 LDHDQ86WU2 507 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 SLF1Q9BQI6 1058 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 VCAM1P19320 739 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 SPC24Q8NBT2 197 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
HIF3A-218ENST00000600383 POTEMA6NI47 508 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-218ENST00000600383 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
HIF3A-218ENST00000600383 USP14P54578 494 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 BACE1P56817 501 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 DPYDQ12882 1025 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 CUL4BQ13620 913 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 SULF1Q8IWU6 871 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 MTRQ99707 1265 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 CCPG1Q9ULG6 757 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-218ENST00000600383 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 MORC3Q14149 939 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 PRR16Q569H4 304 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 NAALADL2Q58DX5 795 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 DRC7Q8IY82 874 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 HAS1Q92839 578 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-218ENST00000600383 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
HIF3A-218ENST00000600383 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
HIF3A-218ENST00000600383 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
HIF3A-218ENST00000600383 PLCG1P19174 1290 aa17.1■□□□□ 0.33
HIF3A-218ENST00000600383 HMGCS2P54868 508 aa17.1■□□□□ 0.33
HIF3A-218ENST00000600383 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
HIF3A-218ENST00000600383 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
HIF3A-218ENST00000600383 NAP1L4Q99733 375 aaKnown RBP17.1■□□□□ 0.33
HIF3A-218ENST00000600383 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
HIF3A-218ENST00000600383 ZNF76P36508 570 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
HIF3A-218ENST00000600383 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
HIF3A-218ENST00000600383 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 WDR18Q9BV38 432 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-218ENST00000600383 UBXN2AP68543 259 aa17.09■□□□□ 0.33
HIF3A-218ENST00000600383 KRT26Q7Z3Y9 468 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms