RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
NFKB1-212ENST00000600343 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
NFKB1-212ENST00000600343 LSM1O15116 133 aaKnown RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ATP10BO94823 1461 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 KRT9P35527 623 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 PEX5P50542 639 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 BIRC3Q13489 604 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 SSH3Q8TE77 659 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 UCMAQ8WVF2 138 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 DNAJC9Q8WXX5 260 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 HIC2Q96JB3 615 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ABCF3Q9NUQ8 709 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ESYT3A0FGR9 886 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 CTNND1O60716 968 aaKnown RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 UBTFL1P0CB47 393 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ARHGAP18Q8N392 663 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 NCOA5Q9HCD5 579 aaKnown RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 EPB41L5Q9HCM4 733 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 HPSEQ9Y251 543 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 SLC4A7Q9Y6M7 1214 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 E7ENQ6 273 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 FYB1O15117 783 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 FOXN1O15353 648 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 MYL6BP14649 208 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 CDC25AP30304 524 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 PSMD7P51665 324 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF131P52739 623 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 MUM1Q2TAK8 710 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 GPATCH3Q96I76 525 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 GPCPD1Q9NPB8 672 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 NKX1-2Q9UD57 310 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ZFYVE9O95405 1425 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 CARMIL3Q8ND23 1372 aa10.82□□□□□ -0.68
NFKB1-212ENST00000600343 ALDH1L1O75891 902 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 WFS1O76024 890 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 XBP1P17861 261 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 HERVK_113P62684 666 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 PKN1Q16512 942 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 PPP1R42Q7Z4L9 355 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CCDC65Q8IXS2 484 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SLC15A3Q8IY34 581 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 UBAP1Q9NZ09 502 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SNX12Q9UMY4 172 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 NOVA2Q9UNW9 492 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 MYH8P13535 1937 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 TRPM2O94759 1503 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ITIH6Q6UXX5 1313 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 MACROD2A1Z1Q3 448 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 GNA14O95837 355 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 HOXD12P35452 270 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CACNA2D1P54289 1103 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CNPY1Q3B7I2 92 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF280DQ6N043 979 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SHC4Q6S5L8 630 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 LRIG3Q6UXM1 1119 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 APTXQ7Z2E3 356 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF554Q86TJ5 538 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 RAB11FIP4Q86YS3 637 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 OR2W6PQ8NHA6 318 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SNRNP27Q8WVK2 155 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 WDR60Q8WVS4 1066 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 XPO6Q96QU8 1125 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 RAB17Q9H0T7 212 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 A0A1W2PP64 1363 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 KCNA3P22001 575 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 PAFAH1B1P43034 410 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 KRT83P78385 493 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 GIGYF2Q6Y7W6 1299 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ELAC2Q9BQ52 826 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 TRPV5Q9NQA5 729 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SMARCAL1Q9NZC9 954 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CTTNBP2NLQ9P2B4 639 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CEP126Q9P2H0 1117 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 QRICH2Q9H0J4 1663 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 ASAP2O43150 1006 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 HEXIM1O94992 359 aaKnown RBP10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CALB2P22676 271 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 PLCD1P51178 756 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 HDAC4P56524 1084 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 SLC44A4Q53GD3 710 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 CCNJLQ8IV13 435 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 RNPEPL1Q9HAU8 725 aa10.81□□□□□ -0.68
NFKB1-212ENST00000600343 GGT7Q9UJ14 662 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms