RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM50BQ9Y247 325 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 SCN10AQ9Y5Y9 1956 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 SIP14410 1827 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 GFRA3O60609 400 aa21.14■□□□□ 0.97
SSBP4-207ENST00000600244 NFRKBQ6P4R8 1299 aa21.14■□□□□ 0.97
SSBP4-207ENST00000600244 PABPC5Q96DU9 382 aaKnown RBP21.14■□□□□ 0.97
SSBP4-207ENST00000600244 PRRX2Q99811 253 aa21.14■□□□□ 0.97
SSBP4-207ENST00000600244 VTA1Q9NP79 307 aa21.14■□□□□ 0.97
SSBP4-207ENST00000600244 FEM1BQ9UK73 627 aa21.14■□□□□ 0.97
SSBP4-207ENST00000600244 GREB1LQ9C091 1923 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-207ENST00000600244 BAZ2AQ9UIF9 1905 aaKnown RBP21.14■□□□□ 0.97
SSBP4-207ENST00000600244 PTPRZ1P23471 2315 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-207ENST00000600244 CACNA1HO95180 2353 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 BCAR3O75815 825 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 PTPN11Q06124 597 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-207ENST00000600244 FAM47CQ5HY64 1035 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 MORC4Q8TE76 937 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 PPP1R13LQ8WUF5 828 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 ALG13Q9NP73 1137 aaKnown RBP21.13■□□□□ 0.97
SSBP4-207ENST00000600244 MUTYHQ9UIF7 546 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
SSBP4-207ENST00000600244 MYL3P08590 195 aa21.12■□□□□ 0.97
SSBP4-207ENST00000600244 RARSP54136 660 aaKnown RBP21.12■□□□□ 0.97
SSBP4-207ENST00000600244 FBXO22Q8NEZ5 403 aa21.12■□□□□ 0.97
SSBP4-207ENST00000600244 EDAQ92838 391 aa21.12■□□□□ 0.97
SSBP4-207ENST00000600244 C17orf80Q9BSJ5 609 aa21.12■□□□□ 0.97
SSBP4-207ENST00000600244 CTNNA3Q9UI47 895 aa21.12■□□□□ 0.97
SSBP4-207ENST00000600244 CPT1AP50416 773 aa21.11■□□□□ 0.97
SSBP4-207ENST00000600244 TCTN1Q2MV58 587 aa21.11■□□□□ 0.97
SSBP4-207ENST00000600244 CNKSR3Q6P9H4 555 aa21.11■□□□□ 0.97
SSBP4-207ENST00000600244 RNF146Q9NTX7 359 aa21.11■□□□□ 0.97
SSBP4-207ENST00000600244 TRIP12Q14669 1992 aaPredicted RBP21.1■□□□□ 0.97
SSBP4-207ENST00000600244 ABHD14A-ACY1A0A1B0GW23 586 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 CXCL10P02778 98 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 FDX1P10109 184 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 PKN1Q16512 942 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 AFAP1L1Q8TED9 768 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 CTAGE1Q96RT6 745 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
SSBP4-207ENST00000600244 TNNQ9UQP3 1299 aa21.1■□□□□ 0.97
SSBP4-207ENST00000600244 MBD4O95243 580 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 PTPROQ16827 1216 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 TIGD5Q53EQ6 642 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 TCEAL5Q5H9L2 206 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 CTR9Q6PD62 1173 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 RNF135Q8IUD6 432 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 AMOTL1Q8IY63 956 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 BANK1Q8NDB2 785 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 MKL1Q969V6 931 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 WDR11Q9BZH6 1224 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 CLIP2Q9UDT6 1046 aa21.09■□□□□ 0.97
SSBP4-207ENST00000600244 IGKV6D-41A0A0C4DH26 115 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 RBM47A0AV96 593 aaKnown RBP21.08■□□□□ 0.97
SSBP4-207ENST00000600244 TRIM27P14373 513 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 RASA1P20936 1047 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 LTBRP36941 435 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 SMAD2Q15796 467 aaKnown RBP21.08■□□□□ 0.97
SSBP4-207ENST00000600244 TKFCQ3LXA3 575 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 PBXIP1Q96AQ6 731 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 CYP39A1Q9NYL5 469 aa21.08■□□□□ 0.97
SSBP4-207ENST00000600244 NBNO60934 754 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 TRIM67Q6ZTA4 783 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 AACSQ86V21 672 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 RPAP2Q8IXW5 612 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-207ENST00000600244 TRERF1Q96PN7 1200 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 FAM86C1Q9NVL1 165 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 INSL6Q9Y581 213 aa21.07■□□□□ 0.96
SSBP4-207ENST00000600244 TMEM221A6NGB7 291 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 A6NJR5 290 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 M0R296 226 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 GOLIM4O00461 696 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 KPNA6O60684 536 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 PARNO95453 639 aaKnown RBP21.06■□□□□ 0.96
SSBP4-207ENST00000600244 SELPP16109 830 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 RBL2Q08999 1139 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 LRRC8DQ7L1W4 858 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 OR6J1Q8NGC5 347 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 SP7Q8TDD2 431 aaPredicted RBP21.06■□□□□ 0.96
SSBP4-207ENST00000600244 PURBQ96QR8 312 aaKnown RBP21.06■□□□□ 0.96
SSBP4-207ENST00000600244 CRBNQ96SW2 442 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 POP1Q99575 1024 aaKnown RBP21.06■□□□□ 0.96
SSBP4-207ENST00000600244 NOD1Q9Y239 953 aa21.06■□□□□ 0.96
SSBP4-207ENST00000600244 EFCAB14O75071 495 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 ADD2P35612 726 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 HTRA4P83105 476 aaPredicted RBP21.05■□□□□ 0.96
SSBP4-207ENST00000600244 PTGISQ16647 500 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 EPC2Q52LR7 807 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 FAM117BQ6P1L5 589 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 CCDC155Q8N6L0 562 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 GMCL1P1Q8NEA9 526 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 DHX38Q92620 1227 aaKnown RBP21.05■□□□□ 0.96
SSBP4-207ENST00000600244 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
SSBP4-207ENST00000600244 SYNPO2Q9UMS6 1093 aa21.05■□□□□ 0.96
SSBP4-207ENST00000600244 C5orf42Q9H799 3197 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 MYO7AQ13402 2215 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 H3BNC9 293 aa21.04■□□□□ 0.96
SSBP4-207ENST00000600244 ALAS1P13196 640 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms