RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TTBK2Q6IQ55 1244 aa20.26■□□□□ 0.83
SMG9-210ENST00000600097 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
SMG9-210ENST00000600097 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
SMG9-210ENST00000600097 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
SMG9-210ENST00000600097 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
SMG9-210ENST00000600097 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
SMG9-210ENST00000600097 TCP11L1Q9NUJ3 509 aa20.26■□□□□ 0.83
SMG9-210ENST00000600097 LRRC37A2A6NM11 1700 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 NFIBO00712 420 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 PFKMP08237 780 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 CPT1AP50416 773 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 TMEM63BQ5T3F8 832 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 PPM1EQ8WY54 764 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 MPHOSPH6Q99547 160 aaKnown RBP20.25■□□□□ 0.83
SMG9-210ENST00000600097 TMEM47Q9BQJ4 181 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 NKX2-4Q9H2Z4 354 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 SLC4A7Q9Y6M7 1214 aa20.25■□□□□ 0.83
SMG9-210ENST00000600097 RBM47A0AV96 593 aaKnown RBP20.24■□□□□ 0.83
SMG9-210ENST00000600097 PTPDC1A2A3K4 754 aa20.24■□□□□ 0.83
SMG9-210ENST00000600097 FGAP02671 866 aa20.24■□□□□ 0.83
SMG9-210ENST00000600097 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
SMG9-210ENST00000600097 RRP12Q5JTH9 1297 aaKnown RBP20.24■□□□□ 0.83
SMG9-210ENST00000600097 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
SMG9-210ENST00000600097 GPHNQ9NQX3 736 aaPredicted RBP20.24■□□□□ 0.83
SMG9-210ENST00000600097 THEGQ9P2T0 379 aa20.24■□□□□ 0.83
SMG9-210ENST00000600097 IGFBP4P22692 258 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 PURAQ00577 322 aaKnown RBP20.23■□□□□ 0.83
SMG9-210ENST00000600097 ADGRE1Q14246 886 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 RNF207Q6ZRF8 634 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 TTC14Q96N46 770 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 GPCPD1Q9NPB8 672 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 SPTBN5Q9NRC6 3674 aaKnown RBP20.23■□□□□ 0.83
SMG9-210ENST00000600097 YBX2Q9Y2T7 364 aaKnown RBP20.23■□□□□ 0.83
SMG9-210ENST00000600097 CHD9Q3L8U1 2897 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 FRMPD2Q68DX3 1309 aaPredicted RBP20.23■□□□□ 0.83
SMG9-210ENST00000600097 RAD50Q92878 1312 aa20.23■□□□□ 0.83
SMG9-210ENST00000600097 MYO9BQ13459 2157 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 NKRFO15226 690 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMG9-210ENST00000600097 PDHBP11177 359 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 PCP11498 1178 aaKnown RBP20.22■□□□□ 0.83
SMG9-210ENST00000600097 PDE1AP54750 535 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 CLEC4DQ8WXI8 215 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 ASB2Q96Q27 587 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 MTG1Q9BT17 334 aaPredicted RBP20.22■□□□□ 0.83
SMG9-210ENST00000600097 TRMT13Q9NUP7 481 aaKnown RBP20.22■□□□□ 0.83
SMG9-210ENST00000600097 PCDHA11Q9Y5I1 949 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 TNKSO95271 1327 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 WDR19Q8NEZ3 1342 aa20.22■□□□□ 0.83
SMG9-210ENST00000600097 ZBBXA8MT70 800 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 B4DLN1 442 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 KPNA6O60684 536 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 MYL3P08590 195 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 CALML3P27482 149 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 MRPL12P52815 198 aaKnown RBP20.21■□□□□ 0.83
SMG9-210ENST00000600097 PDE4DQ08499 809 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 SLC30A10Q6XR72 485 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 DNERQ8NFT8 737 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 OR6J1Q8NGC5 347 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 SCFD2Q8WU76 684 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 SCLYQ96I15 445 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
SMG9-210ENST00000600097 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
SMG9-210ENST00000600097 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
SMG9-210ENST00000600097 CYP2C9P11712 490 aa20.2■□□□□ 0.82
SMG9-210ENST00000600097 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
SMG9-210ENST00000600097 RPS6P62753 249 aaKnown RBP20.2■□□□□ 0.82
SMG9-210ENST00000600097 MRPS5P82675 430 aaKnown RBP20.2■□□□□ 0.82
SMG9-210ENST00000600097 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
SMG9-210ENST00000600097 PPP2R2DQ66LE6 453 aa20.2■□□□□ 0.82
SMG9-210ENST00000600097 VWCEQ96DN2 955 aa20.2■□□□□ 0.82
SMG9-210ENST00000600097 SNHG28P0DPA3 235 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 EDNRBP24530 442 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 RABGGTBP53611 331 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 CCDC85BQ15834 202 aaPredicted RBP20.19■□□□□ 0.82
SMG9-210ENST00000600097 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 MFSD6Q6ZSS7 791 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 TSPYL2Q9H2G4 693 aaPredicted RBP20.19■□□□□ 0.82
SMG9-210ENST00000600097 LCTP09848 1927 aa20.19■□□□□ 0.82
SMG9-210ENST00000600097 A6NJR5 290 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 ACTN1P12814 892 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 RFC2P35250 354 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 PTPN11Q06124 597 aaPredicted RBP20.18■□□□□ 0.82
SMG9-210ENST00000600097 NBPF20Q3BBV1 942 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 FAM47CQ5HY64 1035 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 GPATCH4Q5T3I0 446 aaKnown RBP20.18■□□□□ 0.82
SMG9-210ENST00000600097 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 MAF1Q9H063 256 aa20.18■□□□□ 0.82
SMG9-210ENST00000600097 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
SMG9-210ENST00000600097 PITPNM1O00562 1244 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 NT5C2P49902 561 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 HAND2P61296 217 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
SMG9-210ENST00000600097 TTLL4Q14679 1199 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
SMG9-210ENST00000600097 RETREG2Q8NC44 543 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms