RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 TIFAQ96CG3 184 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 PBX4Q9BYU1 374 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 WNT8AQ9H1J5 351 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 VTA1Q9NP79 307 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 CXXC1Q9P0U4 656 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 MYH6P13533 1939 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
IRF3-223ENST00000599223 NEFLP07196 543 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
IRF3-223ENST00000599223 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 CPVLQ9H3G5 476 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 ZNF576Q9H609 170 aa17.29■□□□□ 0.36
IRF3-223ENST00000599223 SNHG28P0DPA3 235 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 AKNAD1Q5T1N1 836 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 PSRC1Q6PGN9 363 aaPredicted RBP17.28■□□□□ 0.36
IRF3-223ENST00000599223 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 TMEM199Q8N511 208 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 IL23AQ9NPF7 189 aa17.28■□□□□ 0.36
IRF3-223ENST00000599223 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 TRIM6-TRIM34B2RNG4 842 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 CABYRO75952 493 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 CALML3P27482 149 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 DUSP28Q4G0W2 176 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 PPP1R13LQ8WUF5 828 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 Q9Y3F1 56 aa17.27■□□□□ 0.36
IRF3-223ENST00000599223 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 CCL23P55773 120 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 ALDH8A1Q9H2A2 487 aaPredicted RBP17.26■□□□□ 0.35
IRF3-223ENST00000599223 TRMT13Q9NUP7 481 aaKnown RBP17.26■□□□□ 0.35
IRF3-223ENST00000599223 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
IRF3-223ENST00000599223 WDR19Q8NEZ3 1342 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 RBM47A0AV96 593 aaKnown RBP17.25■□□□□ 0.35
IRF3-223ENST00000599223 SDSP20132 328 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 EDNRBP24530 442 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 RPS6P62753 249 aaKnown RBP17.25■□□□□ 0.35
IRF3-223ENST00000599223 PURAQ00577 322 aaKnown RBP17.25■□□□□ 0.35
IRF3-223ENST00000599223 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 MFSD6Q6ZSS7 791 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 ADD3Q9UEY8 706 aaKnown RBP17.25■□□□□ 0.35
IRF3-223ENST00000599223 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
IRF3-223ENST00000599223 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
IRF3-223ENST00000599223 ZEB2O60315 1214 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 IGHDP01880 384 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 USH1GQ495M9 461 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 COPS5Q92905 334 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 SCLYQ96I15 445 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 PRDM12Q9H4Q4 367 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 PRDM6Q9NQX0 595 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 TET1Q8NFU7 2136 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 TRANK1O15050 2925 aa17.24■□□□□ 0.35
IRF3-223ENST00000599223 XIRP2A4UGR9 3374 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 ARIH2O95376 493 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
IRF3-223ENST00000599223 CYP2C9P11712 490 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 CHD1LQ86WJ1 897 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 TTC14Q96N46 770 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 IL25Q9H293 177 aa17.23■□□□□ 0.35
IRF3-223ENST00000599223 TNKSO95271 1327 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 RBAK-RBAKDNI3L0D1 243 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 KDM4AO75164 1064 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 MYL3P08590 195 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 NUCB1Q02818 461 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 ADGRE1Q14246 886 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 PPP2R5BQ15173 497 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
IRF3-223ENST00000599223 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
IRF3-223ENST00000599223 ESR2Q92731 530 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 COL20A1Q9P218 1284 aa17.22■□□□□ 0.35
IRF3-223ENST00000599223 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
IRF3-223ENST00000599223 B4E1Z4 1266 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 FGBP02675 491 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 CPT1AP50416 773 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 RABGGTBP53611 331 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 PDE4DQ08499 809 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
IRF3-223ENST00000599223 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
IRF3-223ENST00000599223 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms