RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
LIG1-217ENST00000599165 TSEN34Q9BSV6 310 aaKnown RBP14.18□□□□□ -0.14
LIG1-217ENST00000599165 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
LIG1-217ENST00000599165 VAT1LQ9HCJ6 419 aa14.18□□□□□ -0.14
LIG1-217ENST00000599165 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
LIG1-217ENST00000599165 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
LIG1-217ENST00000599165 RBM47A0AV96 593 aaKnown RBP14.17□□□□□ -0.14
LIG1-217ENST00000599165 ITGB8P26012 769 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 GHRHRQ02643 423 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 TNFAIP2Q03169 654 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 WTAPQ15007 396 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 TMEM67Q5HYA8 995 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 RALYLQ86SE5 291 aaKnown RBP14.17□□□□□ -0.14
LIG1-217ENST00000599165 SYTL5Q8TDW5 730 aaPredicted RBP14.17□□□□□ -0.14
LIG1-217ENST00000599165 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 VTA1Q9NP79 307 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 ANO2Q9NQ90 1003 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 ATP11BQ9Y2G3 1177 aa14.17□□□□□ -0.14
LIG1-217ENST00000599165 ABCB11O95342 1321 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 LOC102724159A0A0B4J2E5 919 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 TRIM43BA6NCK2 446 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 MOXD2PA6NHM9 499 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 SH2B2O14492 632 aaPredicted RBP14.16□□□□□ -0.14
LIG1-217ENST00000599165 PRC1O43663 620 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 ASGR1P07306 291 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 C6orf222P0C671 652 aaPredicted RBP14.16□□□□□ -0.14
LIG1-217ENST00000599165 BEX3Q00994 111 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 TLE2Q04725 743 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 PWP2Q15269 919 aaKnown RBP14.16□□□□□ -0.14
LIG1-217ENST00000599165 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 FBXO11Q86XK2 927 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 TRIM43Q96BQ3 446 aaPredicted RBP14.16□□□□□ -0.14
LIG1-217ENST00000599165 MYL10Q9BUA6 226 aa14.16□□□□□ -0.14
LIG1-217ENST00000599165 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 ZBTB5O15062 677 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 CDC45O75419 566 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 CDK7P50613 346 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 MDM2Q00987 491 aaPredicted RBP14.15□□□□□ -0.14
LIG1-217ENST00000599165 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 DNERQ8NFT8 737 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 TAAR1Q96RJ0 339 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 PIGSQ96S52 555 aa14.15□□□□□ -0.14
LIG1-217ENST00000599165 ADD3Q9UEY8 706 aaKnown RBP14.15□□□□□ -0.14
LIG1-217ENST00000599165 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
LIG1-217ENST00000599165 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
LIG1-217ENST00000599165 ARIH2O95376 493 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 HSD17B4P51659 736 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 ADCK5Q3MIX3 580 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 DUSP28Q4G0W2 176 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 GNASQ5JWF2 1037 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 IQSEC1Q6DN90 963 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 ANKRD33Q7Z3H0 272 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 ZNF654Q8IZM8 581 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 AMNQ9BXJ7 453 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 MAF1Q9H063 256 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 STARD7Q9NQZ5 370 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 ELP1O95163 1332 aa14.14□□□□□ -0.15
LIG1-217ENST00000599165 ERICH2A1L162 156 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 DYNC1LI2O43237 492 aaPredicted RBP14.13□□□□□ -0.15
LIG1-217ENST00000599165 DDAH1O94760 285 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 RXRAP19793 462 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 MCM5P33992 734 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 FAAP100Q0VG06 881 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 FSCN1Q16658 493 aaKnown RBP14.13□□□□□ -0.15
LIG1-217ENST00000599165 CXCL17Q6UXB2 119 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 SLC43A3Q8NBI5 491 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 PCSK9Q8NBP7 692 aaKnown RBP14.13□□□□□ -0.15
LIG1-217ENST00000599165 COPS5Q92905 334 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 KCNB2Q92953 911 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 LRCH3Q96II8 777 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 WDR11Q9BZH6 1224 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 MRPL11Q9Y3B7 192 aaKnown RBP14.13□□□□□ -0.15
LIG1-217ENST00000599165 Q9Y3F1 56 aa14.13□□□□□ -0.15
LIG1-217ENST00000599165 MYH7BA7E2Y1 1941 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 KIAA0355O15063 1070 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
LIG1-217ENST00000599165 PLEKHA8P1O95397 391 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 EXOSC10Q01780 885 aaKnown RBP14.12□□□□□ -0.15
LIG1-217ENST00000599165 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
LIG1-217ENST00000599165 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 CCDC62Q6P9F0 684 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 RAB11FIP4Q86YS3 637 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 TDHQ8IZJ6 230 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 TMEM87BQ96K49 555 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 TCEANC2Q96MN5 208 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 TOX2Q96NM4 488 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 UBE2OQ9C0C9 1292 aaKnown RBP14.12□□□□□ -0.15
LIG1-217ENST00000599165 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 PCDHA1Q9Y5I3 950 aa14.12□□□□□ -0.15
LIG1-217ENST00000599165 PNMA6FA0A0J9YX94 578 aa14.11□□□□□ -0.15
LIG1-217ENST00000599165 RGS20O76081 388 aa14.11□□□□□ -0.15
LIG1-217ENST00000599165 CLTBP09497 229 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms