RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CALM3P0DP25 149 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 ACVR2BQ13705 512 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 APOA5Q6Q788 366 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 SGMS1Q86VZ5 419 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 MSL3Q8N5Y2 521 aaKnown RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 BRF1Q92994 677 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 MTMR8Q96EF0 704 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 SLKQ9H2G2 1235 aaPredicted RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 BRCA2P51587 3418 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 ASB14A6NK59 587 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 ZBTB43O43298 467 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 PGK1P00558 417 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 CFBP00751 764 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 AKR1A1P14550 325 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 RPS6KB1P23443 525 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 CCDC144BQ3MJ40 725 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 FBXO16Q8IX29 292 aaPredicted RBP13.97□□□□□ -0.17
ZNF548-209ENST00000598895 ANKLE1Q8NAG6 615 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 FANCBQ8NB91 859 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 DPF3Q92784 378 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
ZNF548-209ENST00000598895 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 C11orf49Q9H6J7 331 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 COL20A1Q9P218 1284 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
ZNF548-209ENST00000598895 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
ZNF548-209ENST00000598895 TNRC18O15417 2968 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 GOLGA8AA7E2F4 631 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 GOLGA8BA8MQT2 603 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 OPLAHO14841 1288 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 ADCY6O43306 1168 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 RARBP10826 455 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 PTGS1P23219 599 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 PSMA5P28066 241 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 MCF2L2Q86YR7 1114 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 SNX21Q969T3 373 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 KATNBL1Q9H079 304 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 PDGFCQ9NRA1 345 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
ZNF548-209ENST00000598895 CIZ1Q9ULV3 898 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-209ENST00000598895 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
ZNF548-209ENST00000598895 GNAQP50148 359 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 PDE4DQ08499 809 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 RTN1Q16799 776 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 TMEM63BQ5T3F8 832 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 NOL8Q76FK4 1167 aaKnown RBP13.95□□□□□ -0.18
ZNF548-209ENST00000598895 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
ZNF548-209ENST00000598895 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 LARP6Q9BRS8 491 aaKnown RBP13.95□□□□□ -0.18
ZNF548-209ENST00000598895 HTATIP2Q9BUP3 242 aa13.95□□□□□ -0.18
ZNF548-209ENST00000598895 SENP6Q9GZR1 1112 aaPredicted RBP13.95□□□□□ -0.18
ZNF548-209ENST00000598895 SYNRGQ9UMZ2 1314 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 EPB41L2O43491 1005 aaKnown RBP13.94□□□□□ -0.18
ZNF548-209ENST00000598895 EIF2AK2P19525 551 aaKnown RBP13.94□□□□□ -0.18
ZNF548-209ENST00000598895 CDC27P30260 824 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 MCM4P33991 863 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 LRRC41Q15345 812 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 RUFY3Q7L099 469 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 ARRDC4Q8NCT1 418 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 RGS22Q8NE09 1264 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
ZNF548-209ENST00000598895 CNTNAP5Q8WYK1 1306 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 MYADML2A6NDP7 307 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 DNM1LO00429 736 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 CAPN2P17655 700 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 METAP2P50579 478 aaKnown RBP eCLIP13.93□□□□□ -0.18
ZNF548-209ENST00000598895 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
ZNF548-209ENST00000598895 TNFAIP2Q03169 654 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
ZNF548-209ENST00000598895 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
ZNF548-209ENST00000598895 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
ZNF548-209ENST00000598895 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms