RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 ZEB2O60315 1214 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 PQBP1O60828 265 aaKnown RBP26.86■■□□□ 1.89
SSBP4-205ENST00000598159 SLC30A10Q6XR72 485 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 TLK2Q86UE8 772 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 NCOA7Q8NI08 942 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 BADQ92934 168 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 DDX49Q9Y6V7 483 aaKnown RBP26.86■■□□□ 1.89
SSBP4-205ENST00000598159 ABCB11O95342 1321 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 MROH7Q68CQ1 1323 aa26.86■■□□□ 1.89
SSBP4-205ENST00000598159 ERICH2A1L162 156 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 E7EWF7 191 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 KIAA0355O15063 1070 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 DHX16O60231 1041 aaKnown RBP26.85■■□□□ 1.89
SSBP4-205ENST00000598159 CDK7P50613 346 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 RALYLQ86SE5 291 aaKnown RBP26.85■■□□□ 1.89
SSBP4-205ENST00000598159 JMJD4Q9H9V9 463 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 VAT1LQ9HCJ6 419 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 TMEM39AQ9NV64 488 aa26.85■■□□□ 1.89
SSBP4-205ENST00000598159 LTBP2Q14767 1821 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 A0A0U1RQG5 324 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-205ENST00000598159 IFIT3O14879 490 aaKnown RBP26.84■■□□□ 1.89
SSBP4-205ENST00000598159 CABYRO75952 493 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 BEX3Q00994 111 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 FAAP100Q0VG06 881 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 FBXO11Q86XK2 927 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 MCF2L2Q86YR7 1114 aa26.84■■□□□ 1.89
SSBP4-205ENST00000598159 RBM47A0AV96 593 aaKnown RBP26.83■■□□□ 1.89
SSBP4-205ENST00000598159 KLRF2D3W0D1 207 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 ARVCFO00192 962 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 PDE4DQ08499 809 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 SART3Q15020 963 aaKnown RBP26.83■■□□□ 1.89
SSBP4-205ENST00000598159 FSCN1Q16658 493 aaKnown RBP26.83■■□□□ 1.89
SSBP4-205ENST00000598159 QRICH1Q2TAL8 776 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 DUSP28Q4G0W2 176 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 STAG2Q8N3U4 1231 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 WDR11Q9BZH6 1224 aa26.83■■□□□ 1.89
SSBP4-205ENST00000598159 MRPL11Q9Y3B7 192 aaKnown RBP26.83■■□□□ 1.89
SSBP4-205ENST00000598159 MYH6P13533 1939 aa26.82■■□□□ 1.88
SSBP4-205ENST00000598159 RAG1P15918 1043 aa26.82■■□□□ 1.88
SSBP4-205ENST00000598159 CENPQQ7L2Z9 268 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-205ENST00000598159 SEZ6LQ9BYH1 1024 aa26.82■■□□□ 1.88
SSBP4-205ENST00000598159 MAD2L2Q9UI95 211 aa26.82■■□□□ 1.88
SSBP4-205ENST00000598159 PALM3A6NDB9 673 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-205ENST00000598159 EDNRBP24530 442 aa26.81■■□□□ 1.88
SSBP4-205ENST00000598159 RBM8AQ9Y5S9 174 aaKnown RBP26.81■■□□□ 1.88
SSBP4-205ENST00000598159 LRRC37A2A6NM11 1700 aa26.8■■□□□ 1.88
SSBP4-205ENST00000598159 ITGB8P26012 769 aa26.8■■□□□ 1.88
SSBP4-205ENST00000598159 WTAPQ15007 396 aa26.8■■□□□ 1.88
SSBP4-205ENST00000598159 TBC1D5Q92609 795 aa26.8■■□□□ 1.88
SSBP4-205ENST00000598159 AMNQ9BXJ7 453 aa26.8■■□□□ 1.88
SSBP4-205ENST00000598159 NKRFO15226 690 aaKnown RBP eCLIP26.79■■□□□ 1.882e-6■□□□□ 10.9
SSBP4-205ENST00000598159 TLR3O15455 904 aaKnown RBP26.79■■□□□ 1.88
SSBP4-205ENST00000598159 SHHQ15465 462 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 TMEM63BQ5T3F8 832 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 CXCL17Q6UXB2 119 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 STOX1Q6ZVD7 989 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 MTMR8Q96EF0 704 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 TAF6LQ9Y6J9 622 aa26.79■■□□□ 1.88
SSBP4-205ENST00000598159 GRM4Q14833 912 aa26.78■■□□□ 1.88
SSBP4-205ENST00000598159 SLC43A3Q8NBI5 491 aa26.78■■□□□ 1.88
SSBP4-205ENST00000598159 SYTL5Q8TDW5 730 aaPredicted RBP26.78■■□□□ 1.88
SSBP4-205ENST00000598159 NSUN6Q8TEA1 469 aaKnown RBP26.78■■□□□ 1.88
SSBP4-205ENST00000598159 ZBTB5O15062 677 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 TIMP1P01033 207 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 PTGS1P23219 599 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 TRAF1Q13077 416 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 TMEM67Q5HYA8 995 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 CHST3Q7LGC8 479 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 FAM126BQ8IXS8 530 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 SAMD3Q8N6K7 520 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 IGDCC4Q8TDY8 1250 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 SCFD2Q8WU76 684 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 TAAR1Q96RJ0 339 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 IWS1Q96ST2 819 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 ESYT1Q9BSJ8 1104 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 MTA3Q9BTC8 594 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 LSG1Q9H089 658 aaKnown RBP26.77■■□□□ 1.88
SSBP4-205ENST00000598159 MAP3K20Q9NYL2 800 aaKnown RBP26.77■■□□□ 1.88
SSBP4-205ENST00000598159 TBX21Q9UL17 535 aa26.77■■□□□ 1.88
SSBP4-205ENST00000598159 SZT2Q5T011 3432 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 TROAPQ12815 778 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 ITGA7Q13683 1181 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 BMP2KLQ5H9B9 411 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 CATIPQ7Z7H3 387 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 MB21D2Q8IYB1 491 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-205ENST00000598159 RIOX1Q9H6W3 641 aa26.76■■□□□ 1.87
SSBP4-205ENST00000598159 LAMA3Q16787 3333 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 CPT1AP50416 773 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 FPGSQ05932 587 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 PPP2R5BQ15173 497 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 BRDTQ58F21 947 aaPredicted RBP26.75■■□□□ 1.87
SSBP4-205ENST00000598159 C9orf50Q5SZB4 431 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 DEFB123Q8N688 67 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 RMDN3Q96TC7 470 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 SENP2Q9HC62 589 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 POLR3EQ9NVU0 708 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 PCDHA1Q9Y5I3 950 aa26.75■■□□□ 1.87
SSBP4-205ENST00000598159 CFBP00751 764 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 CD4P01730 458 aa26.74■■□□□ 1.87
SSBP4-205ENST00000598159 ANTXR2P58335 489 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms