RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 STK3Q13188 491 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 PWP2Q15269 919 aaKnown RBP23.47■■□□□ 1.35
PNKP-211ENST00000598020 MFSD14CQ5VZR4 134 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 CPLX2Q6PUV4 134 aaKnown RBP23.47■■□□□ 1.35
PNKP-211ENST00000598020 TINF2Q9BSI4 451 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 SOWAHBA6NEL2 793 aa23.46■■□□□ 1.35
PNKP-211ENST00000598020 CPLX1O14810 134 aa23.46■■□□□ 1.35
PNKP-211ENST00000598020 CNTN2Q02246 1040 aa23.46■■□□□ 1.35
PNKP-211ENST00000598020 PFKFB3Q16875 520 aaPredicted RBP23.46■■□□□ 1.35
PNKP-211ENST00000598020 SLC30A10Q6XR72 485 aa23.46■■□□□ 1.35
PNKP-211ENST00000598020 TBC1D5Q92609 795 aa23.46■■□□□ 1.35
PNKP-211ENST00000598020 BIN2Q9UBW5 565 aaPredicted RBP23.46■■□□□ 1.35
PNKP-211ENST00000598020 SYNGAP1Q96PV0 1343 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 ST18O60284 1047 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 PKN1Q16512 942 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 TEX2Q8IWB9 1127 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 DNERQ8NFT8 737 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 SYTL5Q8TDW5 730 aaPredicted RBP23.45■■□□□ 1.34
PNKP-211ENST00000598020 GTF3C6Q969F1 213 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 ZSCAN31Q96LW9 406 aaPredicted RBP23.45■■□□□ 1.34
PNKP-211ENST00000598020 ADD3Q9UEY8 706 aaKnown RBP23.45■■□□□ 1.34
PNKP-211ENST00000598020 NRBP1Q9UHY1 535 aa23.45■■□□□ 1.34
PNKP-211ENST00000598020 ASTN1O14525 1302 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 CDKL5O76039 1030 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 LARGE1O95461 756 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 SCG2P13521 617 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 CALML3P27482 149 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 AKAP17AQ02040 695 aaKnown RBP23.44■■□□□ 1.34
PNKP-211ENST00000598020 CACNB2Q08289 660 aaPredicted RBP23.44■■□□□ 1.34
PNKP-211ENST00000598020 TRIM32Q13049 653 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 WWC2Q6AWC2 1192 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 PPP1R18Q6NYC8 613 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 NOL8Q76FK4 1167 aaKnown RBP23.44■■□□□ 1.34
PNKP-211ENST00000598020 HEATR3Q7Z4Q2 680 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 TRIM22Q8IYM9 498 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 MORC4Q8TE76 937 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 PHKBQ93100 1093 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 BARHL2Q9NY43 387 aa23.44■■□□□ 1.34
PNKP-211ENST00000598020 RPTORQ8N122 1335 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 ASB14A6NK59 587 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 PIK3CDO00329 1044 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 CFBP00751 764 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 PRKAR2AP13861 404 aaKnown RBP23.43■■□□□ 1.34
PNKP-211ENST00000598020 CYP2C19P33261 490 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 SSRP1Q08945 709 aaKnown RBP23.43■■□□□ 1.34
PNKP-211ENST00000598020 GPKOWQ92917 476 aaPredicted RBP eCLIP23.43■■□□□ 1.34
PNKP-211ENST00000598020 SLC26A6Q9BXS9 759 aa23.43■■□□□ 1.34
PNKP-211ENST00000598020 SH2B1Q9NRF2 756 aaPredicted RBP23.43■■□□□ 1.34
PNKP-211ENST00000598020 GCOM1H8Y6P7 765 aaPredicted RBP23.42■■□□□ 1.34
PNKP-211ENST00000598020 STXBP3O00186 592 aa23.42■■□□□ 1.34
PNKP-211ENST00000598020 POLR2MP0CAP2 368 aa23.42■■□□□ 1.34
PNKP-211ENST00000598020 MTFR1Q15390 333 aa23.42■■□□□ 1.34
PNKP-211ENST00000598020 PURBQ96QR8 312 aaKnown RBP23.42■■□□□ 1.34
PNKP-211ENST00000598020 KIAA0100Q14667 2235 aaKnown RBP23.42■■□□□ 1.34
PNKP-211ENST00000598020 MCM3APO60318 1980 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 STK36Q9NRP7 1315 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 SNAI1O95863 264 aaPredicted RBP23.41■■□□□ 1.34
PNKP-211ENST00000598020 CYBAP13498 195 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 CCL5P13501 91 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 MCM2P49736 904 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 ALDH5A1P51649 535 aaPredicted RBP23.41■■□□□ 1.34
PNKP-211ENST00000598020 TYW1BQ6NUM6 668 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 NECAB1Q8N987 351 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 PSTPIP2Q9H939 334 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 HMX1Q9NP08 348 aaPredicted RBP23.41■■□□□ 1.34
PNKP-211ENST00000598020 PAK6Q9NQU5 681 aaPredicted RBP23.41■■□□□ 1.34
PNKP-211ENST00000598020 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
PNKP-211ENST00000598020 DEXIO95424 95 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 CTDNEP1O95476 244 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 ARMCX2Q7L311 632 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 FAM177A1Q8N128 213 aaPredicted RBP23.4■■□□□ 1.34
PNKP-211ENST00000598020 NSUN6Q8TEA1 469 aaKnown RBP23.4■■□□□ 1.34
PNKP-211ENST00000598020 TAAR1Q96RJ0 339 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 GLT8D2Q9H1C3 349 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 UNC93B1Q9H1C4 597 aa23.4■■□□□ 1.34
PNKP-211ENST00000598020 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.4■■□□□ 1.34
PNKP-211ENST00000598020 ESYT2A0FGR8 921 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 B4DLN1 442 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 MEIS2O14770 477 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 EDNRBP24530 442 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 MRPL12P52815 198 aaKnown RBP23.39■■□□□ 1.33
PNKP-211ENST00000598020 NAPAP54920 295 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 ST3GAL1Q11201 340 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 TRPV1Q8NER1 839 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 CCDC12Q8WUD4 166 aaPredicted RBP23.39■■□□□ 1.33
PNKP-211ENST00000598020 CUL5Q93034 780 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 MPHOSPH6Q99547 160 aaKnown RBP23.39■■□□□ 1.33
PNKP-211ENST00000598020 ABHD16BQ9H3Z7 469 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 SH3GLB2Q9NR46 395 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 CNPY2Q9Y2B0 182 aa23.39■■□□□ 1.33
PNKP-211ENST00000598020 PPFIA3O75145 1194 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 GJB1P08034 283 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 HOXA13P31271 388 aaPredicted RBP23.38■■□□□ 1.33
PNKP-211ENST00000598020 IWS1Q96ST2 819 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 RMDN3Q96TC7 470 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 TMEM106CQ9BVX2 250 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 KATNBL1Q9H079 304 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.38■■□□□ 1.33
PNKP-211ENST00000598020 RNF208Q9H0X6 261 aa23.38■■□□□ 1.33
PNKP-211ENST00000598020 RIC8AQ9NPQ8 531 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms