RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 HMGB1P09429 215 aaKnown RBP19.32■□□□□ 0.68
CAPN12-208ENST00000597740 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
CAPN12-208ENST00000597740 GJA9P57773 515 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 EXOSC10Q01780 885 aaKnown RBP19.32■□□□□ 0.68
CAPN12-208ENST00000597740 CYB5R4Q7L1T6 521 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 ZNF467Q7Z7K2 595 aaPredicted RBP19.32■□□□□ 0.68
CAPN12-208ENST00000597740 CPXCR1Q8N123 301 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 ESR2Q92731 530 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 UPF3AQ9H1J1 476 aaKnown RBP19.32■□□□□ 0.68
CAPN12-208ENST00000597740 ABHD16BQ9H3Z7 469 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 CHD9Q3L8U1 2897 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 NCOR1O75376 2440 aa19.32■□□□□ 0.68
CAPN12-208ENST00000597740 CPA1P15085 419 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 ANTXR2P58335 489 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 TFAP4Q01664 338 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 BLOC1S2Q6QNY1 142 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 RUFY3Q7L099 469 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 DHX32Q7L7V1 743 aaKnown RBP19.31■□□□□ 0.68
CAPN12-208ENST00000597740 NEDD1Q8NHV4 660 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 C1QTNF1Q9BXJ1 281 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 HIPK3Q9H422 1215 aa19.31■□□□□ 0.68
CAPN12-208ENST00000597740 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
CAPN12-208ENST00000597740 CD4P01730 458 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 BMP1P13497 986 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 MCM5P33992 734 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 RABGGTBP53611 331 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 BEX3Q00994 111 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 TFF2Q03403 129 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 RABEP1Q15276 862 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 PPP2R2DQ66LE6 453 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 ANKRD35Q8N283 1001 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
CAPN12-208ENST00000597740 CYP46A1Q9Y6A2 500 aa19.3■□□□□ 0.68
CAPN12-208ENST00000597740 WDR19Q8NEZ3 1342 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 CTAGE5O15320 804 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 CCL23P55773 120 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 SKIV2LQ15477 1246 aaKnown RBP19.29■□□□□ 0.68
CAPN12-208ENST00000597740 CXCL17Q6UXB2 119 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 FGD4Q96M96 766 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.29■□□□□ 0.68
CAPN12-208ENST00000597740 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
CAPN12-208ENST00000597740 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
CAPN12-208ENST00000597740 TCP11L1Q9NUJ3 509 aa19.29■□□□□ 0.68
CAPN12-208ENST00000597740 TSPY2A6NKD2 308 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 PRC1O43663 620 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 ZBED4O75132 1171 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 NDUFB10O96000 172 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 TSPY3P0CV98 308 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 TSPY8P0CW00 308 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 MYOGP15173 224 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 KCNQ1P51787 676 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 NOL8Q76FK4 1167 aaKnown RBP19.28■□□□□ 0.68
CAPN12-208ENST00000597740 CHST3Q7LGC8 479 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
CAPN12-208ENST00000597740 MTA3Q9BTC8 594 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 ALDH8A1Q9H2A2 487 aaPredicted RBP19.28■□□□□ 0.68
CAPN12-208ENST00000597740 GBF1Q92538 1859 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 PLIN4Q96Q06 1357 aa19.28■□□□□ 0.68
CAPN12-208ENST00000597740 TCF20Q9UGU0 1960 aaKnown RBP19.27■□□□□ 0.68
CAPN12-208ENST00000597740 IGKV6D-41A0A0C4DH26 115 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 F5H6K3 240 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
CAPN12-208ENST00000597740 NEK4P51957 841 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 KLRC3Q07444 240 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 AAK1Q2M2I8 961 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 KIFC2Q96AC6 838 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 TTC14Q96N46 770 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 IL17RBQ9NRM6 502 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 SLC4A7Q9Y6M7 1214 aa19.27■□□□□ 0.68
CAPN12-208ENST00000597740 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.26■□□□□ 0.67
CAPN12-208ENST00000597740 ZBBXA8MT70 800 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 CCDC178Q5BJE1 867 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 FBXL16Q8N461 479 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 IGDCC4Q8TDY8 1250 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 TMEM87BQ96K49 555 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 TCEANC2Q96MN5 208 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 ZKSCAN3Q9BRR0 538 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 KATNBL1Q9H079 304 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
CAPN12-208ENST00000597740 MCM3APO60318 1980 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 NMT2O60551 498 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 NOVP48745 357 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 ITGA7Q13683 1181 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 SEC23AQ15436 765 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 Q6ZUG5 572 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 SLC43A3Q8NBI5 491 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 ZSCAN10Q96SZ4 725 aaPredicted RBP19.25■□□□□ 0.67
CAPN12-208ENST00000597740 NOC4LQ9BVI4 516 aaKnown RBP19.25■□□□□ 0.67
CAPN12-208ENST00000597740 LRRC2Q9BYS8 371 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 AGXT2Q9BYV1 514 aa19.25■□□□□ 0.67
CAPN12-208ENST00000597740 TRPV6Q9H1D0 765 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms