RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ATN1P54259 1190 aaPredicted RBP15.19■□□□□ 0.02
USE1-207ENST00000596136 TNFAIP2Q03169 654 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 RNF20Q5VTR2 975 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 CATIPQ7Z7H3 387 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 KCNB2Q92953 911 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 GDF15Q99988 308 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
USE1-207ENST00000596136 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
USE1-207ENST00000596136 Q9Y3F1 56 aa15.19■□□□□ 0.02
USE1-207ENST00000596136 DDX49Q9Y6V7 483 aaKnown RBP15.19■□□□□ 0.02
USE1-207ENST00000596136 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
USE1-207ENST00000596136 OPLAHO14841 1288 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
USE1-207ENST00000596136 DDAH1O94760 285 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 CALML3P27482 149 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 ACLYP53396 1101 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 RTP1P59025 263 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 KCNA10Q16322 511 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 SAMD3Q8N6K7 520 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 PDGFCQ9NRA1 345 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
USE1-207ENST00000596136 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
USE1-207ENST00000596136 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
USE1-207ENST00000596136 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
USE1-207ENST00000596136 A0A1W2PPC1 479 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 A0A1W2PQ45 241 aaPredicted RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 A0A1W2PQY0 241 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 MYADML2A6NDP7 307 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 DHX16O60231 1041 aaKnown RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 SMPD1P17405 629 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 EXOSC10Q01780 885 aaKnown RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 TRAF1Q13077 416 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 SYTL5Q8TDW5 730 aaPredicted RBP15.17■□□□□ 0.02
USE1-207ENST00000596136 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 SPZ1Q9BXG8 430 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 SPC25Q9HBM1 224 aa15.17■□□□□ 0.02
USE1-207ENST00000596136 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 B4DLN1 442 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 C6orf222P0C671 652 aaPredicted RBP15.16■□□□□ 0.02
USE1-207ENST00000596136 SYN1P17600 705 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 HSD17B4P51659 736 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
USE1-207ENST00000596136 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
USE1-207ENST00000596136 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 NEK1Q96PY6 1258 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 PIGSQ96S52 555 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 MPHOSPH6Q99547 160 aaKnown RBP15.16■□□□□ 0.02
USE1-207ENST00000596136 COL20A1Q9P218 1284 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 PCDHA1Q9Y5I3 950 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 ELP1O95163 1332 aa15.16■□□□□ 0.02
USE1-207ENST00000596136 SLC34A2O95436 690 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 ASGR1P07306 291 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 CALM1P0DP23 149 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 CALM2P0DP24 149 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 CALM3P0DP25 149 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 KIF5BP33176 963 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 KRT32Q14532 448 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 TRIM60Q495X7 471 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
USE1-207ENST00000596136 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 TLK2Q86UE8 772 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
USE1-207ENST00000596136 NSUN6Q8TEA1 469 aaKnown RBP15.15■□□□□ 0.02
USE1-207ENST00000596136 TOX2Q96NM4 488 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 TAAR1Q96RJ0 339 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 ATP11BQ9Y2G3 1177 aa15.15■□□□□ 0.02
USE1-207ENST00000596136 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
USE1-207ENST00000596136 HSPA4P34932 840 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 MAGEA10P43363 369 aaPredicted RBP15.14■□□□□ 0.01
USE1-207ENST00000596136 GNAQP50148 359 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 CDK7P50613 346 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 PDE4DQ08499 809 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 MYL10Q9BUA6 226 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
USE1-207ENST00000596136 NKRFO15226 690 aaKnown RBP eCLIP15.13■□□□□ 0.01
USE1-207ENST00000596136 DYNC1LI2O43237 492 aaPredicted RBP15.13■□□□□ 0.01
USE1-207ENST00000596136 CFBP00751 764 aa15.13■□□□□ 0.01
USE1-207ENST00000596136 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
USE1-207ENST00000596136 HMGB1P09429 215 aaKnown RBP15.13■□□□□ 0.01
USE1-207ENST00000596136 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms