RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
PNKP-204ENST00000594661 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 M0R2N6 131 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
PNKP-204ENST00000594661 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 CCDC17Q96LX7 622 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 PIGSQ96S52 555 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 A1CFQ9NQ94 594 aaKnown RBP17.25■□□□□ 0.35
PNKP-204ENST00000594661 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
PNKP-204ENST00000594661 ENTPD3O75355 529 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 CCDC148Q8NFR7 591 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 PDE11AQ9HCR9 933 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 LRCH2Q5VUJ6 765 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 TATDN1Q6P1N9 297 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 RIOX1Q9H6W3 641 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
PNKP-204ENST00000594661 HOOK1Q9UJC3 728 aaKnown RBP17.24■□□□□ 0.35
PNKP-204ENST00000594661 CLRN2A0PK11 232 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 KIF3CO14782 793 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 POLR2DO15514 142 aaKnown RBP17.23■□□□□ 0.35
PNKP-204ENST00000594661 EIF3JO75822 258 aaKnown RBP17.23■□□□□ 0.35
PNKP-204ENST00000594661 TXLNAP40222 546 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
PNKP-204ENST00000594661 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 HDXQ7Z353 690 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 MICALL1Q8N3F8 863 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 KAT2BQ92831 832 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 PCDHA6Q9UN73 950 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 PCDHA8Q9Y5H6 950 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 FOXN1O15353 648 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 NAPAP54920 295 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 ZNF543Q08ER8 600 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
PNKP-204ENST00000594661 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
PNKP-204ENST00000594661 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
PNKP-204ENST00000594661 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
PNKP-204ENST00000594661 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 GDF11O95390 407 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 HNRNPH1P31943 449 aaKnown RBP17.22■□□□□ 0.35
PNKP-204ENST00000594661 PTGDRQ13258 359 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 DLGAP5Q15398 846 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 GOLGA1Q92805 767 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 FAN1Q9Y2M0 1017 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 PCDHA5Q9Y5H7 936 aa17.22■□□□□ 0.35
PNKP-204ENST00000594661 ERLIN2O94905 339 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 BMP15O95972 392 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 EEF2P13639 858 aaKnown RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 MNAT1P51948 309 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 CXCL9Q07325 125 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 NCAPHQ15003 741 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 SEPT2Q15019 361 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 C11orf91Q3C1V1 193 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 BEND6Q5SZJ8 279 aaPredicted RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 GALNT17Q6IS24 598 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 KCNV1Q6PIU1 500 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 PDILTQ8N807 584 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 FAM71BQ8TC56 605 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 CSRNP1Q96S65 589 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 ZMYND12Q9H0C1 365 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 MCM7P33993 719 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 JAG1P78504 1218 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
PNKP-204ENST00000594661 POSTNQ15063 836 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 RNF217Q8TC41 542 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
PNKP-204ENST00000594661 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 NFKBIEO00221 500 aa17.2■□□□□ 0.34
PNKP-204ENST00000594661 IKBKBO14920 756 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 278.5 ms