RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ZEB2O60315 1214 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 DDAH1O94760 285 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 GNAQP50148 359 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 ANTXR2P58335 489 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 RTP1P59025 263 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 ZNF654Q8IZM8 581 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 LENG1Q96BZ8 264 aaPredicted RBP20.15■□□□□ 0.82
IRF3-208ENST00000594387 GLT1D1Q96MS3 346 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 MAP3K14Q99558 947 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 LBHD1Q9BQE6 289 aaPredicted RBP20.15■□□□□ 0.82
IRF3-208ENST00000594387 STARD7Q9NQZ5 370 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 PCDHA1Q9Y5I3 950 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 LRRC37A2A6NM11 1700 aa20.15■□□□□ 0.82
IRF3-208ENST00000594387 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 REC8O95072 547 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 ACLYP53396 1101 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 GJA9P57773 515 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 TROAPQ12815 778 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 KCNA10Q16322 511 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 FBXO16Q8IX29 292 aaPredicted RBP20.14■□□□□ 0.81
IRF3-208ENST00000594387 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 PURBQ96QR8 312 aaKnown RBP20.14■□□□□ 0.81
IRF3-208ENST00000594387 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 LY9Q9HBG7 655 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 MAP3K20Q9NYL2 800 aaKnown RBP20.14■□□□□ 0.81
IRF3-208ENST00000594387 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
IRF3-208ENST00000594387 A0A1W2PQ45 241 aaPredicted RBP20.13■□□□□ 0.81
IRF3-208ENST00000594387 A0A1W2PQY0 241 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 CFBP00751 764 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
IRF3-208ENST00000594387 LIFRP42702 1097 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 SAMD3Q8N6K7 520 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 KLHDC9Q8NEP7 349 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 NSUN6Q8TEA1 469 aaKnown RBP20.13■□□□□ 0.81
IRF3-208ENST00000594387 KATNBL1Q9H079 304 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
IRF3-208ENST00000594387 RIOX1Q9H6W3 641 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 SEC63Q9UGP8 760 aaKnown RBP20.13■□□□□ 0.81
IRF3-208ENST00000594387 Q9Y3F1 56 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 MYH7BA7E2Y1 1941 aa20.13■□□□□ 0.81
IRF3-208ENST00000594387 PNMA6FA0A0J9YX94 578 aa20.12■□□□□ 0.81
IRF3-208ENST00000594387 HMGB1P09429 215 aaKnown RBP20.12■□□□□ 0.81
IRF3-208ENST00000594387 FGD1P98174 961 aa20.12■□□□□ 0.81
IRF3-208ENST00000594387 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
IRF3-208ENST00000594387 C1orf53Q5VUE5 145 aa20.12■□□□□ 0.81
IRF3-208ENST00000594387 TLK2Q86UE8 772 aa20.12■□□□□ 0.81
IRF3-208ENST00000594387 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
IRF3-208ENST00000594387 PIGSQ96S52 555 aa20.12■□□□□ 0.81
IRF3-208ENST00000594387 ASTN1O14525 1302 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.11■□□□□ 0.81
IRF3-208ENST00000594387 SH2B2O14492 632 aaPredicted RBP20.11■□□□□ 0.81
IRF3-208ENST00000594387 DYNC1LI2O43237 492 aaPredicted RBP20.11■□□□□ 0.81
IRF3-208ENST00000594387 ASGR1P07306 291 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 SMARCA1P28370 1054 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 TRIM60Q495X7 471 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 ARHGEF16Q5VV41 709 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 TAPT1Q6NXT6 567 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 IWS1Q96ST2 819 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 RMDN3Q96TC7 470 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 WDR11Q9BZH6 1224 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 PRDM5Q9NQX1 630 aaPredicted RBP20.11■□□□□ 0.81
IRF3-208ENST00000594387 PDGFCQ9NRA1 345 aa20.11■□□□□ 0.81
IRF3-208ENST00000594387 RBM27Q9P2N5 1060 aaKnown RBP20.11■□□□□ 0.81
IRF3-208ENST00000594387 ELP1O95163 1332 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 MROH7Q68CQ1 1323 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 A0A1W2PPC1 479 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 NKRFO15226 690 aaKnown RBP eCLIP20.1■□□□□ 0.81
IRF3-208ENST00000594387 SMPD1P17405 629 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 SNX17Q15036 470 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 STXBP2Q15833 593 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 TSGA10IPQ3SY00 556 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 DUSP28Q4G0W2 176 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 DHX32Q7L7V1 743 aaKnown RBP20.1■□□□□ 0.81
IRF3-208ENST00000594387 SYTL5Q8TDW5 730 aaPredicted RBP20.1■□□□□ 0.81
IRF3-208ENST00000594387 SCFD2Q8WU76 684 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 MYL10Q9BUA6 226 aa20.1■□□□□ 0.81
IRF3-208ENST00000594387 GNEQ9Y223 722 aaKnown RBP20.1■□□□□ 0.81
IRF3-208ENST00000594387 CABYRO75952 493 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 BMP8BP34820 402 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 TTLL4Q14679 1199 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 PPP2R5BQ15173 497 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 FSCN1Q16658 493 aaKnown RBP20.09■□□□□ 0.81
IRF3-208ENST00000594387 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 TBC1D5Q92609 795 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 TAAR1Q96RJ0 339 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 SPZ1Q9BXG8 430 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
IRF3-208ENST00000594387 UBE2OQ9C0C9 1292 aaKnown RBP20.09■□□□□ 0.81
IRF3-208ENST00000594387 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
IRF3-208ENST00000594387 A0A0U1RQG5 324 aaPredicted RBP20.08■□□□□ 0.81
IRF3-208ENST00000594387 MYADML2A6NDP7 307 aa20.08■□□□□ 0.81
IRF3-208ENST00000594387 GCOM1H8Y6P7 765 aaPredicted RBP20.08■□□□□ 0.81
IRF3-208ENST00000594387 ADCY6O43306 1168 aa20.08■□□□□ 0.81
IRF3-208ENST00000594387 POLR2MP0CAP2 368 aa20.08■□□□□ 0.81
IRF3-208ENST00000594387 MAGEA10P43363 369 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms