RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 P2RX7Q99572 595 aaKnown RBP23.66■■□□□ 1.38
PNKP-203ENST00000593946 ANO3Q9BYT9 981 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 PNMA2Q9UL42 364 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 CCNT1O60563 726 aaKnown RBP23.65■■□□□ 1.38
PNKP-203ENST00000593946 FOSP01100 380 aaPredicted RBP23.65■■□□□ 1.38
PNKP-203ENST00000593946 PFKFB1P16118 471 aa23.65■■□□□ 1.38
PNKP-203ENST00000593946 ZNF445P59923 1031 aa23.65■■□□□ 1.38
PNKP-203ENST00000593946 REPS2Q8NFH8 660 aa23.65■■□□□ 1.38
PNKP-203ENST00000593946 RAVER2Q9HCJ3 691 aaKnown RBP23.65■■□□□ 1.38
PNKP-203ENST00000593946 HPSEQ9Y251 543 aa23.65■■□□□ 1.38
PNKP-203ENST00000593946 LAD1O00515 517 aa23.64■■□□□ 1.38
PNKP-203ENST00000593946 TREML2Q5T2D2 321 aa23.64■■□□□ 1.38
PNKP-203ENST00000593946 CPXCR1Q8N123 301 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 CRYGNQ8WXF5 182 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 CSRNP2Q9H175 543 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 NUP62CLQ9H1M0 184 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 TMEM60Q9H2L4 133 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 CLSTN2Q9H4D0 955 aa23.64■■□□□ 1.37
PNKP-203ENST00000593946 GBA2Q9HCG7 927 aaPredicted RBP23.64■■□□□ 1.37
PNKP-203ENST00000593946 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
PNKP-203ENST00000593946 SYCE3A1L190 88 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 NEMFO60524 1076 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 HOXA13P31271 388 aaPredicted RBP23.63■■□□□ 1.37
PNKP-203ENST00000593946 PRPHP41219 470 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 OAZ1P54368 228 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 PPP4R3AQ6IN85 833 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 HOXC10Q9NYD6 342 aa23.63■■□□□ 1.37
PNKP-203ENST00000593946 SPDYE3A6NKU9 549 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 SPDYE16A6NNV3 312 aaPredicted RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 GCOM1H8Y6P7 765 aaPredicted RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 LETM1O95202 739 aaPredicted RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 CFBP00751 764 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 POLR2MP0CAP2 368 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 HOXA7P31268 230 aaPredicted RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 GJA5P36382 358 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 IL17AQ16552 155 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 GADL1Q6ZQY3 521 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 CLEC4DQ8WXI8 215 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 TBC1D5Q92609 795 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 SLC10A4Q96EP9 437 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 VWA3AA6NCI4 1184 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 ATP2A1O14983 1001 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 KINO60870 393 aaKnown RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 TDP2O95551 362 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 SREBF1P36956 1147 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 USP11P51784 963 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 GHRHRQ02643 423 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 SPECC1Q5M775 1068 aa23.62■■□□□ 1.37
PNKP-203ENST00000593946 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
PNKP-203ENST00000593946 CELF2O95319 508 aaKnown RBP23.61■■□□□ 1.37
PNKP-203ENST00000593946 ALAS1P13196 640 aa23.61■■□□□ 1.37
PNKP-203ENST00000593946 HSD17B4P51659 736 aa23.61■■□□□ 1.37
PNKP-203ENST00000593946 MOGSQ13724 837 aa23.61■■□□□ 1.37
PNKP-203ENST00000593946 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
PNKP-203ENST00000593946 NFIBO00712 420 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 ZNF202O95125 648 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 ITGBL1O95965 494 aaPredicted RBP23.6■■□□□ 1.37
PNKP-203ENST00000593946 OR52Z1P0C646 297 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 SYKP43405 635 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 ARHGAP4P98171 946 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 CHADLQ6NUI6 762 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 RBM43Q6ZSC3 357 aaKnown RBP23.6■■□□□ 1.37
PNKP-203ENST00000593946 C2orf69Q8N8R5 385 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 TNMDQ9H2S6 317 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 AGTPBP1Q9UPW5 1226 aa23.6■■□□□ 1.37
PNKP-203ENST00000593946 SLC37A4O43826 429 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 TMEM132BQ14DG7 1078 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 CAMK4Q16566 473 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 MOXD1Q6UVY6 613 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 POTEDQ86YR6 584 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 MCF2L2Q86YR7 1114 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 FAM13BQ9NYF5 915 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 KCNH3Q9ULD8 1083 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 CYP3A7-CYP3A51PA0A087WV96 503 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 CYP3A7P24462 503 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 LONP1P36776 959 aaKnown RBP23.59■■□□□ 1.37
PNKP-203ENST00000593946 MUM1L1Q5H9M0 696 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 LRSAM1Q6UWE0 723 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 DTHD1Q6ZMT9 781 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 USP49Q70CQ1 688 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 FASTKD5Q7L8L6 764 aaKnown RBP23.59■■□□□ 1.37
PNKP-203ENST00000593946 SAMD3Q8N6K7 520 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 MBOAT7Q96N66 472 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 MTMR9Q96QG7 549 aa23.59■■□□□ 1.37
PNKP-203ENST00000593946 SNAPC2Q13487 334 aa23.58■■□□□ 1.37
PNKP-203ENST00000593946 SNRNP48Q6IEG0 339 aaKnown RBP23.58■■□□□ 1.37
PNKP-203ENST00000593946 FCHSD1Q86WN1 690 aa23.58■■□□□ 1.37
PNKP-203ENST00000593946 TIGD1Q96MW7 591 aa23.58■■□□□ 1.37
PNKP-203ENST00000593946 HOMER2Q9NSB8 354 aa23.58■■□□□ 1.37
PNKP-203ENST00000593946 MAP3K20Q9NYL2 800 aaKnown RBP23.58■■□□□ 1.37
PNKP-203ENST00000593946 DDX25Q9UHL0 483 aaKnown RBP23.58■■□□□ 1.37
PNKP-203ENST00000593946 CALCRLQ16602 461 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 GAS2L3Q86XJ1 694 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 SYMPKQ92797 1274 aaKnown RBP23.57■■□□□ 1.36
PNKP-203ENST00000593946 EPSTI1Q96J88 318 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 TRERF1Q96PN7 1200 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 TEX13BQ9BXU2 312 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 RIPK3Q9Y572 518 aa23.57■■□□□ 1.36
PNKP-203ENST00000593946 CTAGE5O15320 804 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms