RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
SMAD4-216ENST00000593223 NLRX1Q86UT6 975 aa7.31□□□□□ -1.24
SMAD4-216ENST00000593223 TMEM145Q8NBT3 493 aa7.31□□□□□ -1.24
SMAD4-216ENST00000593223 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
SMAD4-216ENST00000593223 ARHGEF4Q9NR80 690 aa7.31□□□□□ -1.24
SMAD4-216ENST00000593223 SCG5P05408 212 aa7.3□□□□□ -1.24
SMAD4-216ENST00000593223 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
SMAD4-216ENST00000593223 IQCEQ6IPM2 695 aa7.3□□□□□ -1.24
SMAD4-216ENST00000593223 PPIL6Q8IXY8 311 aa7.3□□□□□ -1.24
SMAD4-216ENST00000593223 LIN37Q96GY3 246 aaPredicted RBP7.3□□□□□ -1.24
SMAD4-216ENST00000593223 SLC6A17Q9H1V8 727 aa7.3□□□□□ -1.24
SMAD4-216ENST00000593223 YBX2Q9Y2T7 364 aaKnown RBP7.3□□□□□ -1.24
SMAD4-216ENST00000593223 CARMIL2Q6F5E8 1435 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 NPHS1O60500 1241 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 FGFR1P11362 822 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 PABPC1P11940 636 aaKnown RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 PNLIPP16233 465 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 CEBPAP49715 358 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 ADGRF1Q5T601 910 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 YOD1Q5VVQ6 348 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 E4F1Q66K89 784 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 ZBTB38Q8NAP3 1195 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 USP33Q8TEY7 942 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 DIO2Q92813 273 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
SMAD4-216ENST00000593223 MMP19Q99542 508 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 CRTAC1Q9NQ79 661 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 FAM53CQ9NYF3 392 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 ACSL6Q9UKU0 697 aa7.29□□□□□ -1.24
SMAD4-216ENST00000593223 ZNF503-AS2A6NEH8 195 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 LRRC10BA6NIK2 292 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 PAX4O43316 350 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 DLX3O60479 287 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 EFEMP2O95967 443 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 FAM153BP0C7A2 387 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 TACR1P25103 407 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 MAP4K2Q12851 820 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 KCNAB2Q13303 367 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 MLANAQ16655 118 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 USP53Q70EK8 1073 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 SHISA4Q96DD7 197 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 BTG4Q9NY30 223 aa7.28□□□□□ -1.24
SMAD4-216ENST00000593223 C7orf72A4D263 438 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 MYO1BO43795 1136 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 ADCY3O60266 1144 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 MVKQ03426 396 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 BICRALQ6AI39 1079 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 SCUBE1Q8IWY4 988 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 OSBP2Q969R2 916 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 CHAMP1Q96JM3 812 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 PIF1Q9H611 641 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 PDLIM7Q9NR12 457 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 GULP1Q9UBP9 304 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-216ENST00000593223 RWDD3Q9Y3V2 267 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 RNF114Q9Y508 228 aa7.27□□□□□ -1.25
SMAD4-216ENST00000593223 TRBV23-1A0A0A0MS06 115 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 OR14I1A6ND48 311 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 CAPNS1P04632 268 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 MSL3P1P0C860 447 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 SDHBP21912 280 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 LTBRP36941 435 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 CORO7P57737 925 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 RBM10P98175 930 aaKnown RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 INF2Q27J81 1249 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 ACBD5Q5T8D3 534 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 MBLAC2Q68D91 279 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 CABP7Q86V35 215 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 LZTR1Q8N653 840 aa7.26□□□□□ -1.25
SMAD4-216ENST00000593223 THAP3Q8WTV1 239 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 NSUN3Q9H649 340 aaKnown RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 TIMM13Q9Y5L4 95 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-216ENST00000593223 BLACEA4D250 179 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-216ENST00000593223 MPOP05164 745 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 RPL11P62913 178 aaKnown RBP7.25□□□□□ -1.25
SMAD4-216ENST00000593223 LONRF2Q1L5Z9 754 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 FAM209AQ5JX71 171 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 DENND5AQ6IQ26 1287 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 PRR23BQ6ZRT6 265 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 IRF2BP1Q8IU81 584 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 CCDC103Q8IW40 242 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 LILRB2Q8N423 598 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 NLGN2Q8NFZ4 835 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 C1orf159Q96HA4 380 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 SLC26A8Q96RN1 970 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 MARCH2Q9P0N8 246 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 PCDHA2Q9Y5H9 948 aa7.25□□□□□ -1.25
SMAD4-216ENST00000593223 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
SMAD4-216ENST00000593223 FUCA1P04066 466 aa7.24□□□□□ -1.25
SMAD4-216ENST00000593223 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
SMAD4-216ENST00000593223 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
SMAD4-216ENST00000593223 C2orf27AQ580R0 203 aa7.24□□□□□ -1.25
SMAD4-216ENST00000593223 ZC3H12BQ5HYM0 836 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms