RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 STXBP3O00186 592 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 ZBTB5O15062 677 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
DDX39A-220ENST00000593008 PLA2G6O60733 806 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 SGPL1O95470 568 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 SLC25A27O95847 323 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 SSRP1Q08945 709 aaKnown RBP11.14□□□□□ -0.63
DDX39A-220ENST00000593008 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 MAP3K21Q5TCX8 1036 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 TRMT44Q8IYL2 757 aaKnown RBP11.14□□□□□ -0.63
DDX39A-220ENST00000593008 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 TBC1D5Q92609 795 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
DDX39A-220ENST00000593008 PURBQ96QR8 312 aaKnown RBP11.14□□□□□ -0.63
DDX39A-220ENST00000593008 TEX13BQ9BXU2 312 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 CCPG1Q9ULG6 757 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
DDX39A-220ENST00000593008 MYH6P13533 1939 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 STK36Q9NRP7 1315 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 CCDC196A0A1B0GTZ2 297 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 NFIBO00712 420 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 HOXC6P09630 235 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 ALAS1P13196 640 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 SCG2P13521 617 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 GNAQP50148 359 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 PKP1Q13835 747 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 KCTD2Q14681 263 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-220ENST00000593008 MFSD14CQ5VZR4 134 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 SLC30A10Q6XR72 485 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 RASGRP4Q8TDF6 673 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-220ENST00000593008 PDE4DIPQ5VU43 2346 aa11.13□□□□□ -0.63
DDX39A-220ENST00000593008 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-220ENST00000593008 ICAM1P05362 532 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 CNGA1P29973 690 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 NPY5RQ15761 445 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 UBE2SQ16763 222 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 FBXO11Q86XK2 927 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 ABRAQ8N0Z2 381 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
DDX39A-220ENST00000593008 CLEC4DQ8WXI8 215 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 PGBD1Q96JS3 809 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 RNF146Q9NTX7 359 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
DDX39A-220ENST00000593008 SMC3Q9UQE7 1217 aa11.12□□□□□ -0.63
DDX39A-220ENST00000593008 LCTP09848 1927 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 CDKL5O76039 1030 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 DEXIO95424 95 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 COPB2P35606 906 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 NAPAP54920 295 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 OLFML2BQ68BL8 750 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 LLPHQ9BRT6 129 aaKnown RBP11.11□□□□□ -0.63
DDX39A-220ENST00000593008 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 TMEM260Q9NX78 707 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 COL20A1Q9P218 1284 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
DDX39A-220ENST00000593008 SMARCA1P28370 1054 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 OAZ1P54368 228 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
DDX39A-220ENST00000593008 BECN1Q14457 450 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 PPP2R5BQ15173 497 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 EARS2Q5JPH6 523 aaKnown RBP11.1□□□□□ -0.63
DDX39A-220ENST00000593008 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 LHX8Q68G74 356 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 UBE2Q1Q7Z7E8 422 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 DPF3Q92784 378 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 PAWRQ96IZ0 340 aaKnown RBP11.1□□□□□ -0.63
DDX39A-220ENST00000593008 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 BARHL2Q9NY43 387 aa11.1□□□□□ -0.63
DDX39A-220ENST00000593008 ASTN1O14525 1302 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 IGHA2P01877 340 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 HSP90AA1P07900 732 aaKnown RBP11.09□□□□□ -0.63
DDX39A-220ENST00000593008 FDX1P10109 184 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 CYBAP13498 195 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 NR5A1Q13285 461 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 KRT40Q6A162 431 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms