RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 TMEM63BQ5T3F8 832 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 ZNF654Q8IZM8 581 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 LRCH3Q96II8 777 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 TCEANC2Q96MN5 208 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 JMJD4Q9H9V9 463 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 PNMA2Q9UL42 364 aa16.2■□□□□ 0.18
CLIP3-205ENST00000592017 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TRIM43BA6NCK2 446 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 PALM3A6NDB9 673 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 DDAH1O94760 285 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 CST5P28325 142 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 NKX3-2P78367 333 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TROAPQ12815 778 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 EEPD1Q7L9B9 569 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 RAB11FIP4Q86YS3 637 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TDHQ8IZJ6 230 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 TRIM43Q96BQ3 446 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
CLIP3-205ENST00000592017 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
CLIP3-205ENST00000592017 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 SMPD1P17405 629 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 RXRAP19793 462 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 CALML3P27482 149 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 HSPA4P34932 840 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 FBXO11Q86XK2 927 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 FBXO16Q8IX29 292 aaPredicted RBP16.18■□□□□ 0.18
CLIP3-205ENST00000592017 CTCFLQ8NI51 663 aaPredicted RBP16.18■□□□□ 0.18
CLIP3-205ENST00000592017 PIBF1Q8WXW3 757 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
CLIP3-205ENST00000592017 PRKAG2Q9UGJ0 569 aa16.18■□□□□ 0.18
CLIP3-205ENST00000592017 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
CLIP3-205ENST00000592017 PLXNA1Q9UIW2 1896 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
CLIP3-205ENST00000592017 ASGR1P07306 291 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 ITGB8P26012 769 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 KIF5BP33176 963 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
CLIP3-205ENST00000592017 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
CLIP3-205ENST00000592017 FGD1P98174 961 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 LRIT3Q3SXY7 679 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 TSGA10IPQ3SY00 556 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
CLIP3-205ENST00000592017 DHX32Q7L7V1 743 aaKnown RBP16.17■□□□□ 0.18
CLIP3-205ENST00000592017 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 TMTC2Q8N394 836 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 SPC25Q9HBM1 224 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 STARD7Q9NQZ5 370 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 ABCB11O95342 1321 aa16.17■□□□□ 0.18
CLIP3-205ENST00000592017 ZBTB5O15062 677 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 DYNC1LI2O43237 492 aaPredicted RBP16.16■□□□□ 0.18
CLIP3-205ENST00000592017 CPA1P15085 419 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 LIFRP42702 1097 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 BEX3Q00994 111 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 SLC35G1Q2M3R5 365 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 ANKRD33Q7Z3H0 272 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 PCSK9Q8NBP7 692 aaKnown RBP16.16■□□□□ 0.18
CLIP3-205ENST00000592017 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 BADQ92934 168 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 PIGSQ96S52 555 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
CLIP3-205ENST00000592017 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
CLIP3-205ENST00000592017 ELP1O95163 1332 aa16.16■□□□□ 0.18
CLIP3-205ENST00000592017 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
CLIP3-205ENST00000592017 CLTBP09497 229 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 CALM1P0DP23 149 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 CALM2P0DP24 149 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 CALM3P0DP25 149 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 CDK7P50613 346 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 EXOSC10Q01780 885 aaKnown RBP16.15■□□□□ 0.18
CLIP3-205ENST00000592017 FAAP100Q0VG06 881 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 KCNB2Q92953 911 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 GLT1D1Q96MS3 346 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 AMNQ9BXJ7 453 aa16.15■□□□□ 0.18
CLIP3-205ENST00000592017 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
CLIP3-205ENST00000592017 LOC102724159A0A0B4J2E5 919 aa16.14■□□□□ 0.17
CLIP3-205ENST00000592017 CYTH3O43739 400 aa16.14■□□□□ 0.17
CLIP3-205ENST00000592017 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms