RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 PCDH10Q9P2E7 1040 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 PCDHA1Q9Y5I3 950 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 SLC12A7Q9Y666 1083 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 PNMA6FA0A0J9YX94 578 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 ADAMTS4O75173 837 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 SMARCA1P28370 1054 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 LRRC26Q2I0M4 334 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 LZTS2Q9BRK4 669 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 SPZ1Q9BXG8 430 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 VTA1Q9NP79 307 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
CIRBP-233ENST00000591622 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
CIRBP-233ENST00000591622 ADCYAP1R1P41586 468 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 GNAQP50148 359 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 TNFAIP2Q03169 654 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 TAPT1Q6NXT6 567 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 EEPD1Q7L9B9 569 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 C7orf61Q8IZ16 206 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 SYTL5Q8TDW5 730 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-233ENST00000591622 TCEANC2Q96MN5 208 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
CIRBP-233ENST00000591622 PHF24Q9UPV7 400 aa19.03■□□□□ 0.64
CIRBP-233ENST00000591622 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-233ENST00000591622 B4DLN1 442 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 OPLAHO14841 1288 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 RXRAP19793 462 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 EDNRBP24530 442 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 MRPL12P52815 198 aaKnown RBP19.02■□□□□ 0.64
CIRBP-233ENST00000591622 PDE4DQ08499 809 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 IQSEC1Q6DN90 963 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 SYNE3Q6ZMZ3 975 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 FBXO16Q8IX29 292 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-233ENST00000591622 FANCBQ8NB91 859 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 TSEN34Q9BSV6 310 aaKnown RBP19.02■□□□□ 0.64
CIRBP-233ENST00000591622 PDGFCQ9NRA1 345 aa19.02■□□□□ 0.64
CIRBP-233ENST00000591622 SMCHD1A6NHR9 2005 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 PLEKHA8P1O95397 391 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 CFBP00751 764 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 HSD17B4P51659 736 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 ATN1P54259 1190 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 GJA9P57773 515 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 GHRHRQ02643 423 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 SRBD1Q8N5C6 995 aaKnown RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 KLHDC9Q8NEP7 349 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 FERMT2Q96AC1 680 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 RRP36Q96EU6 259 aaKnown RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 TAAR1Q96RJ0 339 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 UPF3AQ9H1J1 476 aaKnown RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 SPC25Q9HBM1 224 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 MAP3K20Q9NYL2 800 aaKnown RBP19.01■□□□□ 0.63
CIRBP-233ENST00000591622 COL20A1Q9P218 1284 aa19.01■□□□□ 0.63
CIRBP-233ENST00000591622 LCTP09848 1927 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 C6orf222P0C671 652 aaPredicted RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 SMPD1P17405 629 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 CST5P28325 142 aaPredicted RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 APOA5Q6Q788 366 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 SLC39A5Q6ZMH5 540 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 MICU3Q86XE3 530 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 RAB11FIP4Q86YS3 637 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 SAMD3Q8N6K7 520 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 NSUN6Q8TEA1 469 aaKnown RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 PIBF1Q8WXW3 757 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 RMDN3Q96TC7 470 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
CIRBP-233ENST00000591622 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
CIRBP-233ENST00000591622 MYADML2A6NDP7 307 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 CPA1P15085 419 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 ACLYP53396 1101 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 NKX3-2P78367 333 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 IRX5P78411 483 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-233ENST00000591622 KCNA10Q16322 511 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 BLOC1S2Q6QNY1 142 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 CMTR1Q8N1G2 835 aaKnown RBP18.99■□□□□ 0.63
CIRBP-233ENST00000591622 USP26Q9BXU7 913 aa18.99■□□□□ 0.63
CIRBP-233ENST00000591622 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
CIRBP-233ENST00000591622 LRRC37A2A6NM11 1700 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-233ENST00000591622 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 RBM47A0AV96 593 aaKnown RBP18.98■□□□□ 0.63
CIRBP-233ENST00000591622 MOXD2PA6NHM9 499 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 CTAGE5O15320 804 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 PSMA5P28066 241 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 FGD1P98174 961 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 SNX17Q15036 470 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 GNASQ5JWF2 1037 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 TMEM63BQ5T3F8 832 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 C1orf53Q5VUE5 145 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 TMTC3Q6ZXV5 915 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 TLK2Q86UE8 772 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 PCSK9Q8NBP7 692 aaKnown RBP18.98■□□□□ 0.63
CIRBP-233ENST00000591622 IWS1Q96ST2 819 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 WDR11Q9BZH6 1224 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 Q9Y3F1 56 aa18.98■□□□□ 0.63
CIRBP-233ENST00000591622 KLF18A0A0U1RQI7 1052 aa18.97■□□□□ 0.63
CIRBP-233ENST00000591622 ZBTB43O43298 467 aa18.97■□□□□ 0.63
CIRBP-233ENST00000591622 RPS6KB1P23443 525 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms