RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PREBQ9HCU5 417 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 SERTAD1Q9UHV2 236 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 UBN2Q6ZU65 1347 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 EIF4E1BA6NMX2 242 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 ERVV-2B6SEH9 535 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 STXBP3O00186 592 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 TMED1Q13445 227 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 CUL4BQ13620 913 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 MAIP1Q8WWC4 291 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 WASF1Q92558 559 aa13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-217ENST00000591595 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 A0A0G2JS52 829 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 STX10O60499 249 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 SPECC1LQ69YQ0 1117 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 HIBCHQ6NVY1 386 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 NLRP14Q86W24 1093 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 CNKSR1Q969H4 720 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 MAP3K14Q99558 947 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 N4BP3O15049 544 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 GRIN1Q05586 938 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 MFSD6Q6ZSS7 791 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 RMDN2Q96LZ7 410 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 WDR19Q8NEZ3 1342 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 RGPD5Q99666 1765 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
SMARCA4-217ENST00000591595 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 RTN1Q16799 776 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 DYDC1Q8WWB3 177 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 WDR37Q9Y2I8 494 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 CA8P35219 290 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 AFMP43652 599 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 STX17P56962 302 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 SESN3P58005 492 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 EVA1CP58658 441 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 NR5A1Q13285 461 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 OLFML1Q6UWY5 402 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 MAP3K13O43283 966 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 ATP2C2O75185 946 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 ABCC6O95255 1503 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 SEC24CP53992 1094 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 USP14P54578 494 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 POLE2P56282 527 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 FMR1Q06787 632 aaKnown RBP eCLIP13.49□□□□□ -0.255e-8■■■□□ 18.6
SMARCA4-217ENST00000591595 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 GSPT2Q8IYD1 628 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 TRAIPQ9BWF2 469 aa13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-217ENST00000591595 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 IRS4O14654 1257 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 LGR5O75473 907 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 FAM107AO95990 144 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CCDC175P0C221 793 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 BMP6P22004 513 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 KIF5BP33176 963 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PTGISQ16647 500 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 LCA5Q86VQ0 697 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CORO1BQ9BR76 489 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CABP5Q9NP86 173 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 ASB3Q9Y575 518 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 SNAP23O00161 211 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PPP1R37O75864 691 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 NPTXRO95502 500 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 STARD3NLO95772 234 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 WTAPQ15007 396 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 PPP1R7Q15435 360 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 NTRK3Q16288 839 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 CCDC92Q53HC0 331 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 APLFQ8IW19 511 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 TTLL11Q8NHH1 800 aa13.48□□□□□ -0.25
SMARCA4-217ENST00000591595 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms