RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 SYCE3A1L190 88 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 ZBED4O75132 1171 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 FDX1P10109 184 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 GJA5P36382 358 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 ZNF445P59923 1031 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 ANO3Q9BYT9 981 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
TUBD1-211ENST00000591548 UNCXA6NJT0 531 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CFBP00751 764 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 MOGSQ13724 837 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CAMK4Q16566 473 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 USP49Q70CQ1 688 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 VWA3AA6NCI4 1184 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 LAD1O00515 517 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 NFIBO00712 420 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 NEMFO60524 1076 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 CELF2O95319 508 aaKnown RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 TDP2O95551 362 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 ALAS1P13196 640 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 FKBP1BP68106 108 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 MUM1L1Q5H9M0 696 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 GADL1Q6ZQY3 521 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 GBA2Q9HCG7 927 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 HOXC10Q9NYD6 342 aa12.94□□□□□ -0.34
TUBD1-211ENST00000591548 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-211ENST00000591548 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 SLC37A4O43826 429 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 ZNF202O95125 648 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 HOXA7P31268 230 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-211ENST00000591548 PRPHP41219 470 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 HSD17B4P51659 736 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 USP11P51784 963 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 OAZ1P54368 228 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 TMEM132BQ14DG7 1078 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 CST9Q5W186 159 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 FCHSD1Q86WN1 690 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 KCNH3Q9ULD8 1083 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 RIPK3Q9Y572 518 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-211ENST00000591548 MYH7BA7E2Y1 1941 aa12.93□□□□□ -0.34
TUBD1-211ENST00000591548 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-211ENST00000591548 CYP3A7-CYP3A51PA0A087WV96 503 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 KINO60870 393 aaKnown RBP12.92□□□□□ -0.34
TUBD1-211ENST00000591548 CAPN15O75808 1086 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-211ENST00000591548 OR52Z1P0C646 297 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 CYP3A7P24462 503 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 SREBF1P36956 1147 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 SYKP43405 635 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 ARHGAP4P98171 946 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 GHRHRQ02643 423 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
TUBD1-211ENST00000591548 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
TUBD1-211ENST00000591548 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
TUBD1-211ENST00000591548 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
TUBD1-211ENST00000591548 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 LRSAM1Q6UWE0 723 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 C2orf69Q8N8R5 385 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 SYMPKQ92797 1274 aaKnown RBP12.91□□□□□ -0.34
TUBD1-211ENST00000591548 MBOAT7Q96N66 472 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 FAM13BQ9NYF5 915 aa12.91□□□□□ -0.34
TUBD1-211ENST00000591548 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms