RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-226ENST00000591534 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.61
BRCA1-226ENST00000591534 ZHX1Q9UKY1 873 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-226ENST00000591534 ELP1O95163 1332 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 PATL2C9JE40 543 aaKnown RBP11.2□□□□□ -0.62
BRCA1-226ENST00000591534 ERC2O15083 957 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 TLR3O15455 904 aaKnown RBP11.2□□□□□ -0.62
BRCA1-226ENST00000591534 TRAK2O60296 914 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 NDUFB10O96000 172 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 TSPY3P0CV98 308 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 TSPY8P0CW00 308 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 MAFAQ8NHW3 353 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-226ENST00000591534 CHURC1Q8WUH1 139 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
BRCA1-226ENST00000591534 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
BRCA1-226ENST00000591534 LAMA2P24043 3122 aaKnown RBP11.2□□□□□ -0.62
BRCA1-226ENST00000591534 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 GPAA1O43292 621 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 ADAMTS4O75173 837 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 FOSL2P15408 326 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 KCNA10Q16322 511 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-226ENST00000591534 SEZ6LQ9BYH1 1024 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
BRCA1-226ENST00000591534 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 MYH7P12883 1935 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 DNAJC25-GNG10A0A024R161 153 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 ASB14A6NK59 587 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 ZEB2O60315 1214 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 TIMP1P01033 207 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 CHGBP05060 677 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 BMP3P12645 472 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 CST5P28325 142 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 STAT2P52630 851 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 FAAP100Q0VG06 881 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 PPIGQ13427 754 aaKnown RBP eCLIP11.18□□□□□ -0.621e-6■■■□□ 19.2
BRCA1-226ENST00000591534 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 GNASQ5JWF2 1037 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 TMEM199Q8N511 208 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
BRCA1-226ENST00000591534 RAVER2Q9HCJ3 691 aaKnown RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-226ENST00000591534 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 SMIM22K7EJ46 135 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 HRO43593 1189 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 CABYRO75952 493 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 SLC1A4P43007 532 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 GJA9P57773 515 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 CCDC144BQ3MJ40 725 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 MFSD5Q6N075 450 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 NOL8Q76FK4 1167 aaKnown RBP11.17□□□□□ -0.62
BRCA1-226ENST00000591534 IFNL3Q8IZI9 196 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 NEDD1Q8NHV4 660 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 NAPBQ9H115 298 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
BRCA1-226ENST00000591534 FRMPD3Q5JV73 1810 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 UNC80Q8N2C7 3258 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 ARVCFO00192 962 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 PRDM1O75626 825 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 ASGR1P07306 291 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 TFAP4Q01664 338 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
BRCA1-226ENST00000591534 CCSAPQ6IQ19 270 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-226ENST00000591534 PSRC1Q6PGN9 363 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-226ENST00000591534 ARMCX2Q7L311 632 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 MYLIPQ8WY64 445 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 FSD1Q9BTV5 496 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 AP5M1Q9H0R1 490 aa11.16□□□□□ -0.62
BRCA1-226ENST00000591534 UPF3AQ9H1J1 476 aaKnown RBP11.16□□□□□ -0.62
BRCA1-226ENST00000591534 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms