RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 KANSL2Q9H9L4 492 aa7.51□□□□□ -1.21
VPS4B-205ENST00000591383 UPF2Q9HAU5 1272 aaKnown RBP7.51□□□□□ -1.21
VPS4B-205ENST00000591383 IGKV6D-41A0A0C4DH26 115 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 A0A0G2JLL6 359 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 ERICH2A1L162 156 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 IFIT3O14879 490 aaKnown RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 PRC1O43663 620 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 TTLL1O95922 423 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 VCAM1P19320 739 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 VARSP26640 1264 aaKnown RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 HSPA4P34932 840 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 USP14P54578 494 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 IRX3P78415 501 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 FGD1P98174 961 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 IKQ13123 557 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 KRT32Q14532 448 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 TREML2Q5T2D2 321 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 CYB5R4Q7L1T6 521 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 RASGRP2Q7LDG7 609 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 MB21D2Q8IYB1 491 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-205ENST00000591383 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 TCEANC2Q96MN5 208 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 WDR18Q9BV38 432 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 LRRC2Q9BYS8 371 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 MTMR4Q9NYA4 1195 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 CLIP2Q9UDT6 1046 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 KCNH4Q9UQ05 1017 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 AFG3L2Q9Y4W6 797 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 SNX14Q9Y5W7 946 aa7.5□□□□□ -1.21
VPS4B-205ENST00000591383 A0A1W2PRG0 241 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 BTBD19C9JJ37 291 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 CXCL11O14625 94 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 STAU1O95793 577 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NDUFB10O96000 172 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 FGRP09769 529 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 CPA1P15085 419 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NPR3P17342 541 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 CASTP20810 708 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 MCM5P33992 734 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 BACE1P56817 501 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 ANTXR2P58335 489 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NECTIN1Q15223 517 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 TAF1CQ15572 869 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 ADCK5Q3MIX3 580 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 IFIT1BQ5T764 474 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 FAM43AQ8N2R8 423 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 ENAHQ8N8S7 591 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 SCG3Q8WXD2 468 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NEK1Q96PY6 1258 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 PARK7Q99497 189 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NUP88Q99567 741 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 USP26Q9BXU7 913 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 KIAA1683Q9H0B3 1180 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 RPAP3Q9H6T3 665 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 VCPKMTQ9H867 229 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 KAT14Q9H8E8 782 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 AGTPBP1Q9UPW5 1226 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 ZSWIM8A7E2V4 1837 aa7.49□□□□□ -1.21
VPS4B-205ENST00000591383 COL11A1P12107 1806 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-205ENST00000591383 RBBP6Q7Z6E9 1792 aaKnown RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 PDHXO00330 501 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 BACH1O14867 736 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 WDR46O15213 610 aaKnown RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 ZBTB24O43167 697 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 TOP1P11387 765 aaKnown RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 MAP2K2P36507 400 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 NT5C2P49902 561 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 GDF10P55107 478 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 SKOR1P84550 965 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 MOGSQ13724 837 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 WTAPQ15007 396 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 FAM83BQ5T0W9 1011 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 OTUD7BQ6GQQ9 843 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 BLOC1S2Q6QNY1 142 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 FASTKD5Q7L8L6 764 aaKnown RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 RAB11FIP4Q86YS3 637 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 SMCR8Q8TEV9 937 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 IL17RBQ9NRM6 502 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 NYAP2Q9P242 653 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 TMX2Q9Y320 296 aa7.48□□□□□ -1.21
VPS4B-205ENST00000591383 FRMPD2Q68DX3 1309 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-205ENST00000591383 MYH6P13533 1939 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 CCDC69A6NI79 296 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms