RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
GCDH-213ENST00000590627 ORC3Q9UBD5 711 aaPredicted RBP19.16■□□□□ 0.66
GCDH-213ENST00000590627 V9GY48 417 aaPredicted RBP19.16■□□□□ 0.66
GCDH-213ENST00000590627 ADORA2AP29274 412 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 CNGA1P29973 690 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 DSG3P32926 999 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 CYP2C19P33261 490 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 SLC16A2P36021 539 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
GCDH-213ENST00000590627 CPVLQ9H3G5 476 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 MROH8Q9H579 483 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
GCDH-213ENST00000590627 COL6A3P12111 3177 aa19.15■□□□□ 0.66
GCDH-213ENST00000590627 DNM1LO00429 736 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 DEXIO95424 95 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 CYBAP13498 195 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 ERCC3P19447 782 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 GJB2P29033 226 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 AKAP17AQ02040 695 aaKnown RBP19.14■□□□□ 0.65
GCDH-213ENST00000590627 ABRAQ8N0Z2 381 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.65
GCDH-213ENST00000590627 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 WASF1Q92558 559 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 RRP36Q96EU6 259 aaKnown RBP19.14■□□□□ 0.65
GCDH-213ENST00000590627 DDX11Q96FC9 970 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 SLF1Q9BQI6 1058 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 SENP6Q9GZR1 1112 aaPredicted RBP19.14■□□□□ 0.65
GCDH-213ENST00000590627 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 SLC5A4Q9NY91 659 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 PRR12Q9ULL5 1215 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 DNAH12Q6ZR08 3092 aa19.14■□□□□ 0.65
GCDH-213ENST00000590627 FLOT1O75955 427 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 FDX1P10109 184 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 PKN1Q16512 942 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 PFKFB3Q16875 520 aaPredicted RBP19.13■□□□□ 0.65
GCDH-213ENST00000590627 SPRYD3Q8NCJ5 442 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 TRPV1Q8NER1 839 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 FBXO28Q9NVF7 368 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 PARP14Q460N5 1801 aa19.13■□□□□ 0.65
GCDH-213ENST00000590627 PNMA6FA0A0J9YX94 578 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 PPFIA3O75145 1194 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 DDIT3P35638 169 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 IKQ13123 557 aaPredicted RBP19.12■□□□□ 0.65
GCDH-213ENST00000590627 FAM184AQ8NB25 1140 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 ARRDC4Q8NCT1 418 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
GCDH-213ENST00000590627 VAT1LQ9HCJ6 419 aa19.12■□□□□ 0.65
GCDH-213ENST00000590627 ZBTB5O15062 677 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 DTNBO60941 627 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 COBLO75128 1261 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 SCG2P13521 617 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 PDCP20941 246 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 NCAPG2Q86XI2 1143 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
GCDH-213ENST00000590627 DEFB123Q8N688 67 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 KIFC2Q96AC6 838 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 ATG4CQ96DT6 458 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 PIGSQ96S52 555 aa19.11■□□□□ 0.65
GCDH-213ENST00000590627 SEC63Q9UGP8 760 aaKnown RBP19.11■□□□□ 0.65
GCDH-213ENST00000590627 hCG_1984214I3L0E3 225 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 SEPT4O43236 478 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 SLC25A27O95847 323 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
GCDH-213ENST00000590627 PLS1Q14651 629 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 CDC37Q16543 378 aaPredicted RBP19.1■□□□□ 0.65
GCDH-213ENST00000590627 ZNF713Q8N859 430 aaPredicted RBP19.1■□□□□ 0.65
GCDH-213ENST00000590627 SLC17A8Q8NDX2 589 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 ALG1Q9BT22 464 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 SLC38A10Q9HBR0 1119 aa19.1■□□□□ 0.65
GCDH-213ENST00000590627 BAZ2BQ9UIF8 2168 aaKnown RBP19.09■□□□□ 0.65
GCDH-213ENST00000590627 hCG_1642624A0A1W2PR95 340 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 FCER1AP12319 257 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
GCDH-213ENST00000590627 QRICH1Q2TAL8 776 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 HOMER1Q86YM7 354 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 SH3GLB2Q9NR46 395 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
GCDH-213ENST00000590627 ZNFX1Q9P2E3 1918 aaKnown RBP19.09■□□□□ 0.65
GCDH-213ENST00000590627 KBTBD13C9JR72 458 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 VWA5AO00534 786 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 PPP1R11O60927 126 aaPredicted RBP19.08■□□□□ 0.64
GCDH-213ENST00000590627 ATN1P54259 1190 aaPredicted RBP19.08■□□□□ 0.64
GCDH-213ENST00000590627 TRAF1Q13077 416 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 TMEM132BQ14DG7 1078 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 LARP1BQ659C4 914 aaKnown RBP19.08■□□□□ 0.64
GCDH-213ENST00000590627 PIBF1Q8WXW3 757 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 MAML3Q96JK9 1138 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 LBHD1Q9BQE6 289 aaPredicted RBP19.08■□□□□ 0.64
GCDH-213ENST00000590627 BARHL2Q9NY43 387 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 PRKAG2Q9UGJ0 569 aa19.08■□□□□ 0.64
GCDH-213ENST00000590627 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
GCDH-213ENST00000590627 ATP2A1O14983 1001 aa19.07■□□□□ 0.64
GCDH-213ENST00000590627 ZBED4O75132 1171 aa19.07■□□□□ 0.64
GCDH-213ENST00000590627 SYT1P21579 422 aa19.07■□□□□ 0.64
GCDH-213ENST00000590627 OAZ1P54368 228 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms