RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 SPRED2Q7Z698 418 aa16.75■□□□□ 0.27
SAFB2-205ENST00000590000 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
SAFB2-205ENST00000590000 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
SAFB2-205ENST00000590000 NECAB3Q96P71 396 aaPredicted RBP16.75■□□□□ 0.27
SAFB2-205ENST00000590000 RANBP17Q9H2T7 1088 aaKnown RBP16.75■□□□□ 0.27
SAFB2-205ENST00000590000 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
SAFB2-205ENST00000590000 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
SAFB2-205ENST00000590000 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 ASB14A6NK59 587 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 TNFRSF10AO00220 468 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
SAFB2-205ENST00000590000 FDX1P10109 184 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 PDE1AP54750 535 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 TKFCQ3LXA3 575 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 SLC30A10Q6XR72 485 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 FSD1Q9BTV5 496 aa16.74■□□□□ 0.27
SAFB2-205ENST00000590000 ALDH8A1Q9H2A2 487 aaPredicted RBP16.74■□□□□ 0.27
SAFB2-205ENST00000590000 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 ALDH5A1P51649 535 aaPredicted RBP16.73■□□□□ 0.27
SAFB2-205ENST00000590000 IKQ13123 557 aaPredicted RBP16.73■□□□□ 0.27
SAFB2-205ENST00000590000 IQSEC1Q6DN90 963 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 CHD1LQ86WJ1 897 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 SYMPKQ92797 1274 aaKnown RBP16.73■□□□□ 0.27
SAFB2-205ENST00000590000 COPS5Q92905 334 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 ASB2Q96Q27 587 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
SAFB2-205ENST00000590000 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
SAFB2-205ENST00000590000 FRMPD2Q68DX3 1309 aaPredicted RBP16.72■□□□□ 0.27
SAFB2-205ENST00000590000 BRWD1Q9NSI6 2320 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 TRIP12Q14669 1992 aaPredicted RBP16.72■□□□□ 0.27
SAFB2-205ENST00000590000 RBM47A0AV96 593 aaKnown RBP16.72■□□□□ 0.27
SAFB2-205ENST00000590000 CABYRO75952 493 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 ICAM1P05362 532 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 IGFBP4P22692 258 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 PURAQ00577 322 aaKnown RBP16.72■□□□□ 0.27
SAFB2-205ENST00000590000 NUCB1Q02818 461 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 TFF2Q03403 129 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 KRT40Q6A162 431 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 AP5M1Q9H0R1 490 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 THEGQ9P2T0 379 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 Q9Y3F1 56 aa16.72■□□□□ 0.27
SAFB2-205ENST00000590000 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 ORC4O43929 436 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
SAFB2-205ENST00000590000 ARIH2O95376 493 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 GPNMBQ14956 572 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 RAB30Q15771 203 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 ADAMTS19Q8TE59 1207 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.27
SAFB2-205ENST00000590000 FAM227BQ96M60 508 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
SAFB2-205ENST00000590000 COL9A1P20849 921 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
SAFB2-205ENST00000590000 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 WDR11Q9BZH6 1224 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 GPCPD1Q9NPB8 672 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 MSRAQ9UJ68 235 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 TNKSO95271 1327 aa16.7■□□□□ 0.26
SAFB2-205ENST00000590000 FGAP02671 866 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 EDNRBP24530 442 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 TCTN1Q2MV58 587 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 CERS4Q9HA82 394 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 SLC28A3Q9HAS3 691 aa16.69■□□□□ 0.26
SAFB2-205ENST00000590000 COL4A4P53420 1690 aaPredicted RBP16.69■□□□□ 0.26
SAFB2-205ENST00000590000 MYL3P08590 195 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 PDHBP11177 359 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 BMP1P13497 986 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 KCNQ1P51787 676 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 ALX1Q15699 326 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 TBC1D10CQ8IV04 446 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 SLC4A7Q9Y6M7 1214 aa16.68■□□□□ 0.26
SAFB2-205ENST00000590000 TRIM6-TRIM34B2RNG4 842 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 CA3P07451 260 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
SAFB2-205ENST00000590000 SNHG28P0DPA3 235 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 CALML3P27482 149 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 HAND2P61296 217 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
SAFB2-205ENST00000590000 LRRFIP1Q32MZ4 808 aaKnown RBP16.67■□□□□ 0.26
SAFB2-205ENST00000590000 PPP2R2DQ66LE6 453 aa16.67■□□□□ 0.26
SAFB2-205ENST00000590000 TMCO2Q7Z6W1 182 aaPredicted RBP16.67■□□□□ 0.26
SAFB2-205ENST00000590000 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms