RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 WFDC8Q8IUA0 241 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 ANKRD13AQ8IZ07 590 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 RAET1EQ8TD07 263 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 CPA4Q9UI42 421 aa10.05□□□□□ -0.8
SMAD4-209ENST00000589941 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 NEFLP07196 543 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 ELNP15502 786 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 IREB2P48200 963 aaKnown RBP10.04□□□□□ -0.8
SMAD4-209ENST00000589941 VGLL4Q14135 290 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 KIF22Q14807 665 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 COPS6Q7L5N1 327 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 DEFB118Q96PH6 123 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 CDX2Q99626 313 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-209ENST00000589941 SH2B1Q9NRF2 756 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-209ENST00000589941 GABRQQ9UN88 632 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 XDHP47989 1333 aa10.04□□□□□ -0.8
SMAD4-209ENST00000589941 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 ITGB2P05107 769 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 PRMT2P55345 433 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 PLCB3Q01970 1234 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 MAP3K12Q12852 859 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 CNGB1Q14028 1251 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 CERS5Q8N5B7 392 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 TMEM102Q8N9M5 508 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 USP38Q8NB14 1042 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 MYLIPQ8WY64 445 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 NXPE3Q969Y0 559 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 DNAJC25Q9H1X3 360 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 NPHS2Q9NP85 383 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 MYO3BQ8WXR4 1341 aa10.03□□□□□ -0.8
SMAD4-209ENST00000589941 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
SMAD4-209ENST00000589941 NCOR1O75376 2440 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 A0A1W2PP55 124 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 CCER2I3L3R5 266 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 DEAF1O75398 565 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-209ENST00000589941 GTF2A2P52657 109 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 GRIK4Q16099 956 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 FAM109BQ6ICB4 259 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-209ENST00000589941 C17orf99Q6UX52 265 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 ZSCAN29Q8IWY8 852 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-209ENST00000589941 CCDC74AQ96AQ1 378 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
SMAD4-209ENST00000589941 PHIPQ8WWQ0 1821 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-209ENST00000589941 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
SMAD4-209ENST00000589941 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
SMAD4-209ENST00000589941 EPHA1P21709 976 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 CDC25BP30305 580 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 UBXN2AP68543 259 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 PRRT3Q5FWE3 981 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 TXNDC11Q6PKC3 985 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 FMR1NBQ8N0W7 255 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-209ENST00000589941 ISCA1Q9BUE6 129 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 ADAM19Q9H013 955 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 PAK6Q9NQU5 681 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-209ENST00000589941 SNCAIPQ9Y6H5 919 aa10.01□□□□□ -0.81
SMAD4-209ENST00000589941 METTL12A8MUP2 240 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 LINC01387J3KSC0 135 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 CDC27P30260 824 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 RASA3Q14644 834 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10□□□□□ -0.81
SMAD4-209ENST00000589941 EPS8L3Q8TE67 593 aaKnown RBP10□□□□□ -0.81
SMAD4-209ENST00000589941 SNX27Q96L92 541 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 TEPSINQ96N21 525 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 CACNA1AO00555 2505 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 SYNGAP1Q96PV0 1343 aa10□□□□□ -0.81
SMAD4-209ENST00000589941 PNMA6FA0A0J9YX94 578 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 F8W031 263 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 HTATSF1O43719 755 aaKnown RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PTPRAP18433 802 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 DLGAP5Q15398 846 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 ENOX2Q16206 610 aaKnown RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 SUPT20HL1Q3ZLR7 823 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 NECAB2Q7Z6G3 386 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 ALYREFQ86V81 257 aaKnown RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 JARID2Q92833 1246 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PRMT6Q96LA8 375 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 TCF12Q99081 682 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 TTYH1Q9H313 450 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PPME1Q9Y570 386 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PFASO15067 1338 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 PIEZO1Q92508 2521 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 CHD9Q3L8U1 2897 aa9.99□□□□□ -0.81
SMAD4-209ENST00000589941 XIRP2A4UGR9 3374 aa9.98□□□□□ -0.81
SMAD4-209ENST00000589941 ADCY3O60266 1144 aa9.98□□□□□ -0.81
SMAD4-209ENST00000589941 CHRNA4P43681 627 aa9.98□□□□□ -0.81
SMAD4-209ENST00000589941 MAPK8P45983 427 aa9.98□□□□□ -0.81
SMAD4-209ENST00000589941 RAC1P63000 192 aa9.98□□□□□ -0.81
SMAD4-209ENST00000589941 SETDB1Q15047 1291 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms