RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.92	■■■□□ 2.06	8e-8	■■□□□ 12
LSM7-205	ENST00000589532	TMEM265	A0A087WTH1	108 aa		27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	CABYR	O75952	493 aa		27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	EDNRB	P24530	442 aa		27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	RASIP1	Q5U651	963 aa		27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	CWC27	Q6UX04	472 aa	Known RBP	27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	DGKH	Q86XP1	1220 aa		27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	ADD3	Q9UEY8	706 aa	Known RBP	27.91	■■■□□ 2.06
LSM7-205	ENST00000589532	RBM47	A0AV96	593 aa	Known RBP	27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	DUSP28	Q4G0W2	176 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	NOL8	Q76FK4	1167 aa	Known RBP	27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	ZKSCAN3	Q9BRR0	538 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	DSCC1	Q9BVC3	393 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	IL25	Q9H293	177 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	CHD7	Q9P2D1	2997 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	PNMA2	Q9UL42	364 aa		27.9	■■■□□ 2.06
LSM7-205	ENST00000589532	DLL1	O00548	723 aa		27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	ZNF213	O14771	459 aa		27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	DYNC1LI2	O43237	492 aa	Predicted RBP	27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	GPATCH4	Q5T3I0	446 aa	Known RBP	27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	ANKS1A	Q92625	1134 aa		27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	AP5M1	Q9H0R1	490 aa		27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	DIAPH3	Q9NSV4	1193 aa		27.89	■■■□□ 2.06
LSM7-205	ENST00000589532	SCN10A	Q9Y5Y9	1956 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	PTPDC1	A2A3K4	754 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	TLR3	O15455	904 aa	Known RBP	27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	CSF2RA	P15509	400 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	RPS6	P62753	249 aa	Known RBP	27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	PPIG	Q13427	754 aa	Known RBP eCLIP	27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	ITGA7	Q13683	1181 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	TMEM240	Q5SV17	173 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	VTI1A	Q96AJ9	217 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	PPP1R12C	Q9BZL4	782 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	CPVL	Q9H3G5	476 aa		27.88	■■■□□ 2.05
LSM7-205	ENST00000589532	HIP1	O00291	1037 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	KDM4A	O75164	1064 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	GOLGA8H	P0CJ92	632 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	RNF207	Q6ZRF8	634 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	KIAA1211	Q6ZU35	1233 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	PNMA1	Q8ND90	353 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	PPP4R2	Q9NY27	417 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	UMODL1	Q5DID0	1318 aa		27.87	■■■□□ 2.05
LSM7-205	ENST00000589532	CALML3	P27482	149 aa		27.86	■■■□□ 2.05
LSM7-205	ENST00000589532	SEZ6L	Q9BYH1	1024 aa		27.86	■■■□□ 2.05
LSM7-205	ENST00000589532		B4E1Z4	1266 aa		27.85	■■■□□ 2.05
LSM7-205	ENST00000589532	DNAJB2	P25686	324 aa		27.85	■■■□□ 2.05
LSM7-205	ENST00000589532	ENAH	Q8N8S7	591 aa	Predicted RBP	27.85	■■■□□ 2.05
LSM7-205	ENST00000589532	MYLIP	Q8WY64	445 aa		27.85	■■■□□ 2.05
LSM7-205	ENST00000589532	WDR11	Q9BZH6	1224 aa		27.85	■■■□□ 2.05
LSM7-205	ENST00000589532	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	ZEB2	O60315	1214 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	B4GALT4	O60513	344 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	PDE4A	P27815	886 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	CYP2C18	P33260	490 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	PSMC6	P62333	389 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	IQCA1	Q86XH1	822 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	TMEM199	Q8N511	208 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	RGS22	Q8NE09	1264 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	DNER	Q8NFT8	737 aa		27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	NOC4L	Q9BVI4	516 aa	Known RBP	27.84	■■■□□ 2.05
LSM7-205	ENST00000589532	GSPT1	P15170	499 aa	Known RBP	27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	PURA	Q00577	322 aa	Known RBP	27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	CDC37	Q16543	378 aa	Predicted RBP	27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	CCDC178	Q5BJE1	867 aa		27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	UBA5	Q9GZZ9	404 aa		27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	TRPV6	Q9H1D0	765 aa		27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	WNT8A	Q9H1J5	351 aa		27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	TNKS	O95271	1327 aa		27.83	■■■□□ 2.05
LSM7-205	ENST00000589532	MYH6	P13533	1939 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	USH1G	Q495M9	461 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	VWCE	Q96DN2	955 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	HIPK3	Q9H422	1215 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	IL23A	Q9NPF7	189 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	ZSWIM5	Q9P217	1185 aa		27.82	■■■□□ 2.04
LSM7-205	ENST00000589532	GBF1	Q92538	1859 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	TANC1	Q9C0D5	1861 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	ACR	P10323	421 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	IMMT	Q16891	758 aa	Known RBP	27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	ASPRV1	Q53RT3	343 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	ZNF365	Q70YC5	407 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	MAFA	Q8NHW3	353 aa	Predicted RBP	27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	MAF1	Q9H063	256 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	KAT14	Q9H8E8	782 aa		27.81	■■■□□ 2.04
LSM7-205	ENST00000589532	CPT1A	P50416	773 aa		27.8	■■■□□ 2.04
LSM7-205	ENST00000589532	ADGRF4	Q8IZF3	695 aa		27.8	■■■□□ 2.04
LSM7-205	ENST00000589532	POLR3E	Q9NVU0	708 aa		27.8	■■■□□ 2.04
LSM7-205	ENST00000589532	COL20A1	Q9P218	1284 aa		27.8	■■■□□ 2.04
LSM7-205	ENST00000589532	ABCB11	O95342	1321 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	ARIH2	O95376	493 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	PDE4D	Q08499	809 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	PPP2R5B	Q15173	497 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	SCFD2	Q8WU76	684 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	HERVK_113	Q902F9	699 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	PBX4	Q9BYU1	374 aa		27.79	■■■□□ 2.04
LSM7-205	ENST00000589532	KIAA1217	Q5T5P2	1943 aa		27.79	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 114 ms