RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 TMEM240Q5SV17 173 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 KIAA1211Q6ZU35 1233 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 MYLIPQ8WY64 445 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
ZNF397-206ENST00000589420 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
ZNF397-206ENST00000589420 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
ZNF397-206ENST00000589420 LRRC37A2A6NM11 1700 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 WDR19Q8NEZ3 1342 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 PTPDC1A2A3K4 754 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 SDSP20132 328 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 CYP2C18P33260 490 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
ZNF397-206ENST00000589420 B4GALNT3Q6L9W6 998 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 RNF207Q6ZRF8 634 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 CHD1LQ86WJ1 897 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 CLEC4DQ8WXI8 215 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 ESR2Q92731 530 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 TIFAQ96CG3 184 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 MPHOSPH6Q99547 160 aaKnown RBP12.93□□□□□ -0.34
ZNF397-206ENST00000589420 HIPK3Q9H422 1215 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 OSBPL3Q9H4L5 887 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
ZNF397-206ENST00000589420 GRIN2DO15399 1336 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 RBM47A0AV96 593 aaKnown RBP12.92□□□□□ -0.34
ZNF397-206ENST00000589420 ZNF213O14771 459 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 PTGS1P23219 599 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 CALML3P27482 149 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 TMEM63BQ5T3F8 832 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 COL25A1Q9BXS0 654 aaPredicted RBP12.92□□□□□ -0.34
ZNF397-206ENST00000589420 WDR11Q9BZH6 1224 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
ZNF397-206ENST00000589420 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
ZNF397-206ENST00000589420 B4DLN1 442 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 HIP1O00291 1037 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 ACRP10323 421 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 CPT1AP50416 773 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
ZNF397-206ENST00000589420 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
ZNF397-206ENST00000589420 NUCB1Q02818 461 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 PDE4DQ08499 809 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 GRIN2CQ14957 1233 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 DNERQ8NFT8 737 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
ZNF397-206ENST00000589420 MAF1Q9H063 256 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 TRPV6Q9H1D0 765 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 DIAPH3Q9NSV4 1193 aa12.91□□□□□ -0.34
ZNF397-206ENST00000589420 NEDD4P46934 1319 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 LCTP09848 1927 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZNF397-206ENST00000589420 B4GALT4O60513 344 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 SUPT20HL2P0C7V6 817 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 EDNRBP24530 442 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 PSMC6P62333 389 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 BRDTQ58F21 947 aaPredicted RBP12.9□□□□□ -0.34
ZNF397-206ENST00000589420 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
ZNF397-206ENST00000589420 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
ZNF397-206ENST00000589420 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
ZNF397-206ENST00000589420 RAD50Q92878 1312 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 VCANP13611 3396 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 KPNA6O60684 536 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 KDM4AO75164 1064 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 IGHDP01880 384 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 FGBP02675 491 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 PBX2P40425 430 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
ZNF397-206ENST00000589420 PPP2R5BQ15173 497 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 RAB30Q15771 203 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
ZNF397-206ENST00000589420 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 MTG1Q9BT17 334 aaPredicted RBP12.89□□□□□ -0.35
ZNF397-206ENST00000589420 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
ZNF397-206ENST00000589420 MSRAQ9UJ68 235 aa12.89□□□□□ -0.35
ZNF397-206ENST00000589420 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
ZNF397-206ENST00000589420 MYL3P08590 195 aa12.88□□□□□ -0.35
ZNF397-206ENST00000589420 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
ZNF397-206ENST00000589420 CCL23P55773 120 aa12.88□□□□□ -0.35
ZNF397-206ENST00000589420 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
ZNF397-206ENST00000589420 USH1GQ495M9 461 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms