RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 GDF2Q9UK05 429 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-210ENST00000588972 PCDHGC5Q9Y5F6 944 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 TJP1Q07157 1748 aa9.92□□□□□ -0.82
ATG4D-210ENST00000588972 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 USP42Q9H9J4 1324 aaKnown RBP9.91□□□□□ -0.82
ATG4D-210ENST00000588972 FAM86C2PA6NEL3 165 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 SUSD5O60279 629 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 LILRB5O75023 590 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 PRELPP51888 382 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 RING1Q06587 406 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 SUZ12Q15022 739 aaKnown RBP9.91□□□□□ -0.82
ATG4D-210ENST00000588972 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 KIAA1211LQ6NV74 962 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 KLHL23Q8NBE8 558 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 CSADQ9Y600 493 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
ATG4D-210ENST00000588972 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 ADCY3O60266 1144 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
ATG4D-210ENST00000588972 HMOX1P09601 288 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 NLRP12P59046 1061 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 DDR1Q08345 913 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 SETDB1Q15047 1291 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 TMEM67Q5HYA8 995 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 SULT6B1Q6IMI4 303 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
ATG4D-210ENST00000588972 WDR18Q9BV38 432 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 HIF3AQ9Y2N7 669 aa9.9□□□□□ -0.82
ATG4D-210ENST00000588972 VIRMAQ69YN4 1812 aaKnown RBP9.9□□□□□ -0.82
ATG4D-210ENST00000588972 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
ATG4D-210ENST00000588972 SLC7A5Q01650 507 aa9.89□□□□□ -0.83
ATG4D-210ENST00000588972 LONRF2Q1L5Z9 754 aa9.89□□□□□ -0.83
ATG4D-210ENST00000588972 WNT10AQ9GZT5 417 aa9.89□□□□□ -0.83
ATG4D-210ENST00000588972 EPN3Q9H201 632 aa9.89□□□□□ -0.83
ATG4D-210ENST00000588972 SRP68Q9UHB9 627 aaKnown RBP9.89□□□□□ -0.83
ATG4D-210ENST00000588972 ZNF214Q9UL59 606 aaPredicted RBP9.89□□□□□ -0.83
ATG4D-210ENST00000588972 M0R082 166 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 ADAM11O75078 769 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 AOC2O75106 756 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 DLGAP3O95886 979 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 RAG1P15918 1043 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 CHRNA5P30532 468 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 POLR2BP30876 1174 aaKnown RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 RALBP1Q15311 655 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 GNPTABQ3T906 1256 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 HP1BP3Q5SSJ5 553 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 C1orf229Q6ZS94 237 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 ZNF417Q8TAU3 575 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 CFAP53Q96M91 514 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 ZNF587Q96SQ5 575 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 DDX56Q9NY93 547 aaKnown RBP9.88□□□□□ -0.83
ATG4D-210ENST00000588972 PLAAQ9Y263 795 aa9.88□□□□□ -0.83
ATG4D-210ENST00000588972 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 AFDNP55196 1824 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 HSPA1AP0DMV8 641 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 HSPA1BP0DMV9 641 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 ETF1P62495 437 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 RASSF7Q02833 373 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 PLEKHG6Q3KR16 790 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 AMOTQ4VCS5 1084 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 PPM1JQ5JR12 505 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 LRRC47Q8N1G4 583 aaKnown RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 STAG1Q8WVM7 1258 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
ATG4D-210ENST00000588972 TJP2Q9UDY2 1190 aa9.87□□□□□ -0.83
ATG4D-210ENST00000588972 MYBBP1AQ9BQG0 1328 aaKnown RBP9.86□□□□□ -0.83
ATG4D-210ENST00000588972 SCN11AQ9UI33 1791 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 GLTPD2A6NH11 291 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 VEGFAP15692 232 aaPredicted RBP9.86□□□□□ -0.83
ATG4D-210ENST00000588972 ERVK-24P63145 666 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 C1orf141Q5JVX7 400 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 ZBTB37Q5TC79 503 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 MCATQ8IVS2 390 aaKnown RBP9.86□□□□□ -0.83
ATG4D-210ENST00000588972 FAM13CQ8NE31 585 aa9.86□□□□□ -0.83
ATG4D-210ENST00000588972 NXF1Q9UBU9 619 aaKnown RBP9.86□□□□□ -0.83
ATG4D-210ENST00000588972 MRC1P22897 1456 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 SYNGAP1Q96PV0 1343 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 IQCA1LA6NCM1 817 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 TM4SF1P30408 202 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 CCNFP41002 786 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 FOXD4L6Q3SYB3 417 aaPredicted RBP9.85□□□□□ -0.83
ATG4D-210ENST00000588972 ZC3H12BQ5HYM0 836 aaKnown RBP9.85□□□□□ -0.83
ATG4D-210ENST00000588972 FOXD4L3Q6VB84 417 aaPredicted RBP9.85□□□□□ -0.83
ATG4D-210ENST00000588972 KRT26Q7Z3Y9 468 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 MAP4K3Q8IVH8 894 aa9.85□□□□□ -0.83
ATG4D-210ENST00000588972 SLFN12Q8IYM2 578 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms