RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TMOD2Q9NZR1 351 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 LRWD1Q9UFC0 647 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 ITIH6Q6UXX5 1313 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 FER1L6Q2WGJ9 1857 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 GOLGA6L9A6NEM1 432 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 PSMA7O14818 248 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 CTIFO43310 598 aaKnown RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 C21orf2O43822 256 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 KLRC4O43908 158 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 SLC16A2P36021 539 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 GIMAP8Q8ND71 665 aaPredicted RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 DHTKD1Q96HY7 919 aaPredicted RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 PBX1P40424 430 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 PANX2Q96RD6 677 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 PLIN2Q99541 437 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 NAA15Q9BXJ9 866 aaKnown RBP17.15■□□□□ 0.34
MBD1-217ENST00000588937 TRIM9Q9C026 710 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 EXOC1Q9NV70 894 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
MBD1-217ENST00000588937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■□ 20.8
MBD1-217ENST00000588937 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 RAD21O60216 631 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 SEPT2Q15019 361 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 SYCP1Q15431 976 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 TCP11X2Q5H9J9 407 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
MBD1-217ENST00000588937 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
MBD1-217ENST00000588937 BICDL2A1A5D9 508 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 N4BP3O15049 544 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 TEX33O43247 280 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 TDP2O95551 362 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 TRIM14Q14142 442 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
MBD1-217ENST00000588937 KRT31Q15323 416 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 UBE2SQ16763 222 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 QRICH1Q2TAL8 776 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 KRT79Q5XKE5 535 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 CCDC51Q96ER9 411 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
MBD1-217ENST00000588937 THAP9Q9H5L6 903 aa17.13■□□□□ 0.33
MBD1-217ENST00000588937 DDX25Q9UHL0 483 aaKnown RBP17.13■□□□□ 0.33
MBD1-217ENST00000588937 F5H6K3 240 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 SLC37A4O43826 429 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 MARCH6O60337 910 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 EEF1GP26641 437 aaKnown RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 COPB1P53618 953 aaKnown RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 ADKP55263 362 aaKnown RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 ASIC1P78348 528 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 KLRC3Q07444 240 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 CDC37Q16543 378 aaPredicted RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 PTPN21Q16825 1174 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 SLC26A4O43511 780 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 USP11P51784 963 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
MBD1-217ENST00000588937 PDE4DQ08499 809 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 CSRNP1Q96S65 589 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 MAPK8IP1Q9UQF2 711 aa17.12■□□□□ 0.33
MBD1-217ENST00000588937 EDIL3O43854 480 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 GDF11O95390 407 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
MBD1-217ENST00000588937 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 LRRC15Q8TF66 581 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
MBD1-217ENST00000588937 PVALEFA0A1B0GWK0 134 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 CCNE1P24864 410 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 CCT6AP40227 531 aaKnown RBP17.1■□□□□ 0.33
MBD1-217ENST00000588937 RBL2Q08999 1139 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 TRAF1Q13077 416 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 GRB10Q13322 594 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms