RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CTDNEP1O95476 244 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 MRPL12P52815 198 aaKnown RBP22.53■■□□□ 1.2
CIRBP-220ENST00000588917 NAPAP54920 295 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 PKN1Q16512 942 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 NSUN7Q8NE18 718 aaKnown RBP22.53■■□□□ 1.2
CIRBP-220ENST00000588917 CUL5Q93034 780 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 PSTPIP2Q9H939 334 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 ORC3Q9UBD5 711 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-220ENST00000588917 ADD3Q9UEY8 706 aaKnown RBP22.53■■□□□ 1.2
CIRBP-220ENST00000588917 GABRQQ9UN88 632 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-220ENST00000588917 DNAJC25-GNG10A0A024R161 153 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 B4DLN1 442 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 GCOM1H8Y6P7 765 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-220ENST00000588917 CFBP00751 764 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 POLR2MP0CAP2 368 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 CYP2B6P20813 491 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 GHRHRQ02643 423 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 BAATQ14032 418 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-220ENST00000588917 SLC9C1Q4G0N8 1177 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 WWC2Q6AWC2 1192 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 CCDC148Q8NFR7 591 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 PXYLP1Q8TE99 480 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 ZNF333Q96JL9 665 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 MPHOSPH6Q99547 160 aaKnown RBP22.52■■□□□ 1.2
CIRBP-220ENST00000588917 APBA2Q99767 749 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 KIF3AQ9Y496 699 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 PTCH2Q9Y6C5 1203 aa22.52■■□□□ 1.2
CIRBP-220ENST00000588917 LOC102724159A0A0B4J2E5 919 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 K7ELQ4 463 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 STXBP3O00186 592 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 GNA11P29992 359 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 RPS6P62753 249 aaKnown RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 PWP2Q15269 919 aaKnown RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 ZNF792Q3KQV3 632 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 MCTP2Q6DN12 878 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 ZNF467Q7Z7K2 595 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 SMARCC2Q8TAQ2 1214 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 GPKOWQ92917 476 aaPredicted RBP eCLIP22.51■■□□□ 1.195e-13■□□□□ 10.6
CIRBP-220ENST00000588917 C6orf50Q9HD87 102 aa22.51■■□□□ 1.19
CIRBP-220ENST00000588917 KIAA0100Q14667 2235 aaKnown RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 MKI67P46013 3256 aaKnown RBP22.51■■□□□ 1.19
CIRBP-220ENST00000588917 SMCO2A6NFE2 343 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 PIK3CDO00329 1044 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 COBLO75128 1261 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 PPFIA3O75145 1194 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 PGK2P07205 417 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 CALML3P27482 149 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 HSD17B4P51659 736 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 MSL3Q8N5Y2 521 aaKnown RBP22.5■■□□□ 1.19
CIRBP-220ENST00000588917 FAM133AQ8N9E0 248 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 SLAIN1Q8ND83 568 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 DNERQ8NFT8 737 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 BICD2Q8TD16 824 aa22.5■■□□□ 1.19
CIRBP-220ENST00000588917 ESYT2A0FGR8 921 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 ADCY3O60266 1144 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 TAL1P17542 331 aaPredicted RBP22.49■■□□□ 1.19
CIRBP-220ENST00000588917 GALNT17Q6IS24 598 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 FAM184AQ8NB25 1140 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 ZMYND12Q9H0C1 365 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 RIC8AQ9NPQ8 531 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 MGAMO43451 1857 aa22.49■■□□□ 1.19
CIRBP-220ENST00000588917 ASB14A6NK59 587 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 OPLAHO14841 1288 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 ADCY7P51828 1080 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 NLRP5P59047 1200 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 ST3GAL1Q11201 340 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 CUL4AQ13619 759 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 OLFML2BQ68BL8 750 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 TBC1D5Q92609 795 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 MAML3Q96JK9 1138 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 ALG1Q9BT22 464 aa22.48■■□□□ 1.19
CIRBP-220ENST00000588917 FOSP01100 380 aaPredicted RBP22.47■■□□□ 1.19
CIRBP-220ENST00000588917 FDPSP14324 419 aaKnown RBP22.47■■□□□ 1.19
CIRBP-220ENST00000588917 GRK4P32298 578 aa22.47■■□□□ 1.19
CIRBP-220ENST00000588917 TRIM29Q14134 588 aa22.47■■□□□ 1.19
CIRBP-220ENST00000588917 SYTL5Q8TDW5 730 aaPredicted RBP22.47■■□□□ 1.19
CIRBP-220ENST00000588917 INTS4Q96HW7 963 aaKnown RBP22.47■■□□□ 1.19
CIRBP-220ENST00000588917 BAZ2BQ9UIF8 2168 aaKnown RBP22.46■■□□□ 1.19
CIRBP-220ENST00000588917 JAK2O60674 1132 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 CNTN2Q02246 1040 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 MFSD14CQ5VZR4 134 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 MAMDC4Q6UXC1 1216 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 SLC30A10Q6XR72 485 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 NPLOC4Q8TAT6 608 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 NSUN6Q8TEA1 469 aaKnown RBP22.46■■□□□ 1.19
CIRBP-220ENST00000588917 VPS54Q9P1Q0 977 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 SMC3Q9UQE7 1217 aa22.46■■□□□ 1.19
CIRBP-220ENST00000588917 BRCA2P51587 3418 aa22.45■■□□□ 1.19
CIRBP-220ENST00000588917 ZNF236Q9UL36 1845 aa22.45■■□□□ 1.19
CIRBP-220ENST00000588917 MYH6P13533 1939 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 SPDYE3A6NKU9 549 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 MEIS2O14770 477 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 TYW1BQ6NUM6 668 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 IWS1Q96ST2 819 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 RMDN3Q96TC7 470 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 TINF2Q9BSI4 451 aa22.45■■□□□ 1.18
CIRBP-220ENST00000588917 EHMT1Q9H9B1 1298 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms