RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 F5H6K3 240 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 WNT10BO00744 389 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 TBC1D12O60347 775 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 NEMFO60524 1076 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
SMAD4-206ENST00000588860 BMP3P12645 472 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 TXLNAP40222 546 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 MMP14P50281 582 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 KLRC3Q07444 240 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 UBE2SQ16763 222 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 LETM2Q2VYF4 491 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 SYDE2Q5VT97 1194 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 DTHD1Q6ZMT9 781 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 MIGA2Q7L4E1 593 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 NEK8Q86SG6 692 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 MICALL2Q8IY33 904 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 TBCKQ8TEA7 893 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 CUL5Q93034 780 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 SMARCE1Q969G3 411 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 CCDC34Q96HJ3 373 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 BPIFA3Q9BQP9 254 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 PYM1Q9BRP8 204 aaKnown RBP9.94□□□□□ -0.82
SMAD4-206ENST00000588860 TMEM60Q9H2L4 133 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 GOPCQ9HD26 462 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
SMAD4-206ENST00000588860 SYNPO2Q9UMS6 1093 aa9.94□□□□□ -0.82
SMAD4-206ENST00000588860 ZNF541Q9H0D2 1346 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 ESPNB1AK53 854 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 TMEM232C9JQI7 657 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 FZD9O00144 591 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 LAD1O00515 517 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 SMC2O95347 1197 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 OR52Z1P0C646 297 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 SLFN14P0C7P3 912 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 ZNF75DP51815 510 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
SMAD4-206ENST00000588860 LBX1P52954 281 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 SNAP25P60880 206 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-206ENST00000588860 ACER1Q8TDN7 264 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 RRAGDQ9NQL2 400 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-206ENST00000588860 PGAP2Q9UHJ9 254 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 MAN1B1Q9UKM7 699 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 SCAF8Q9UPN6 1271 aaKnown RBP9.93□□□□□ -0.82
SMAD4-206ENST00000588860 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
SMAD4-206ENST00000588860 COL11A1P12107 1806 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-206ENST00000588860 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 EGFRP00533 1210 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 PRPHP41219 470 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 ECE1P42892 770 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 AFMP43652 599 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 TPM4P67936 248 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-206ENST00000588860 TNFAIP1Q13829 316 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 RASA3Q14644 834 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 KIF4BQ2VIQ3 1234 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 TBC1D10BQ4KMP7 808 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-206ENST00000588860 ZSCAN30Q86W11 494 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 PLA2G4DQ86XP0 818 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 SPICE1Q8N0Z3 855 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 IQUBQ8NA54 791 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 SPC24Q8NBT2 197 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 PAGE5Q96GU1 130 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 GLT8D2Q9H1C3 349 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 PSTPIP2Q9H939 334 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-206ENST00000588860 CNOT7Q9UIV1 285 aaKnown RBP9.92□□□□□ -0.82
SMAD4-206ENST00000588860 PCDHA1Q9Y5I3 950 aa9.92□□□□□ -0.82
SMAD4-206ENST00000588860 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
SMAD4-206ENST00000588860 GOLGA6L6A8MZA4 724 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 CAP2P40123 477 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 STAT6P42226 847 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
SMAD4-206ENST00000588860 MORC3Q14149 939 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 ZYXQ15942 572 aaKnown RBP9.91□□□□□ -0.82
SMAD4-206ENST00000588860 E2F4Q16254 413 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 CALCRLQ16602 461 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 KIAA1755Q5JYT7 1200 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 FAM83BQ5T0W9 1011 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 PDXDC2PQ6P474 469 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 SARM1Q6SZW1 724 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 BTNL9Q6UXG8 535 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 SAMD7Q7Z3H4 446 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 SH3RF1Q7Z6J0 888 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 DRC7Q8IY82 874 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 DPF2Q92785 391 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 AMNQ9BXJ7 453 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 SH2D4AQ9H788 454 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 DACH1Q9UI36 760 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 HACL1Q9UJ83 578 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 TMX2Q9Y320 296 aa9.91□□□□□ -0.82
SMAD4-206ENST00000588860 PP2D1A8MPX8 630 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 H7C1D1 291 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 TDP2O95551 362 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 TAL1P17542 331 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms