RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-208ENST00000588692 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 TAPT1Q6NXT6 567 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 ANO2Q9NQ90 1003 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
DDX39A-208ENST00000588692 Q9Y3F1 56 aa16.82■□□□□ 0.28
DDX39A-208ENST00000588692 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-208ENST00000588692 ASGR1P07306 291 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 SMPD1P17405 629 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 EDNRBP24530 442 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 ANTXR2P58335 489 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 TLE2Q04725 743 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 PDE4DQ08499 809 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 TROAPQ12815 778 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 TRAF1Q13077 416 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 TDHQ8IZJ6 230 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 AP5M1Q9H0R1 490 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
DDX39A-208ENST00000588692 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
DDX39A-208ENST00000588692 SLC27A2O14975 620 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 ZBTB5O15062 677 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CTAGE5O15320 804 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 MDM2Q00987 491 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-208ENST00000588692 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 IGDCC4Q8TDY8 1250 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 PRDM5Q9NQX1 630 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-208ENST00000588692 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 RBM47A0AV96 593 aaKnown RBP16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CDC45O75419 566 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CABYRO75952 493 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CLTBP09497 229 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 MCM5P33992 734 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 FSCN1Q16658 493 aaKnown RBP16.8■□□□□ 0.28
DDX39A-208ENST00000588692 DUSP28Q4G0W2 176 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 RIOX1Q9H6W3 641 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
DDX39A-208ENST00000588692 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-208ENST00000588692 PRC1O43663 620 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 ZEB2O60315 1214 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 PQBP1O60828 265 aaKnown RBP16.79■□□□□ 0.28
DDX39A-208ENST00000588692 DDAH1O94760 285 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 NEFLP07196 543 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 GHRHRQ02643 423 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 TMTC2Q8N394 836 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 SAMD3Q8N6K7 520 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 SYTL5Q8TDW5 730 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-208ENST00000588692 SCFD2Q8WU76 684 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 WDR11Q9BZH6 1224 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
DDX39A-208ENST00000588692 MAP3K20Q9NYL2 800 aaKnown RBP16.79■□□□□ 0.28
DDX39A-208ENST00000588692 DCDC2CA8MYV0 355 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 NKRFO15226 690 aaKnown RBP eCLIP16.78■□□□□ 0.28
DDX39A-208ENST00000588692 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-208ENST00000588692 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-208ENST00000588692 BEX3Q00994 111 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 LRIT3Q3SXY7 679 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
DDX39A-208ENST00000588692 SEZ6LQ9BYH1 1024 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
DDX39A-208ENST00000588692 KIAA0355O15063 1070 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 KIF5BP33176 963 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-208ENST00000588692 VTI1AQ96AJ9 217 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 IWS1Q96ST2 819 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.28
DDX39A-208ENST00000588692 TRIM43BA6NCK2 446 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 ARVCFO00192 962 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 SH2B2O14492 632 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-208ENST00000588692 PPP1R11O60927 126 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-208ENST00000588692 LIFRP42702 1097 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 CDK7P50613 346 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 HSD17B4P51659 736 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 FAAP100Q0VG06 881 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 SLC35G1Q2M3R5 365 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 TRIM43Q96BQ3 446 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-208ENST00000588692 PIGSQ96S52 555 aa16.76■□□□□ 0.27
DDX39A-208ENST00000588692 RMDN3Q96TC7 470 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms