RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
HDAC5-207ENST00000588261 PDRG1Q9NUG6 133 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 FEM1BQ9UK73 627 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 NID2Q14112 1375 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 TMEM232C9JQI7 657 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 BMP3P12645 472 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 SLC1A4P43007 532 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 TROAPQ12815 778 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 ZNF467Q7Z7K2 595 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-207ENST00000588261 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
HDAC5-207ENST00000588261 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-207ENST00000588261 AGBL1Q96MI9 1066 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-207ENST00000588261 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-207ENST00000588261 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
HDAC5-207ENST00000588261 SOWAHBA6NEL2 793 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 ZBED4O75132 1171 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 CPA1P15085 419 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 ACLYP53396 1101 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 DDX11Q96FC9 970 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 HOMER2Q9NSB8 354 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 EYSQ5T1H1 3165 aa17.28■□□□□ 0.36
HDAC5-207ENST00000588261 LCTP09848 1927 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 LRRC37A2A6NM11 1700 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 TMEM265A0A087WTH1 108 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 KIAA0355O15063 1070 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 CLTBP09497 229 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 NEK4P51957 841 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 OAZ1P54368 228 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 ZNF543Q08ER8 600 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 ACVR2BQ13705 512 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 GRM4Q14833 912 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 KCNA10Q16322 511 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 TMEM63BQ5T3F8 832 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 APOA5Q6Q788 366 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 KCTD1Q719H9 257 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 ARMCX2Q7L311 632 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 RNF180Q86T96 592 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 FAM160B2Q86V87 743 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 BRF1Q92994 677 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 A1CFQ9NQ94 594 aaKnown RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 GPHNQ9NQX3 736 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-207ENST00000588261 MYO9BQ13459 2157 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.36
HDAC5-207ENST00000588261 ST18O60284 1047 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 DUSP11O75319 330 aaKnown RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 FDX1P10109 184 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 CST5P28325 142 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 KIF5BP33176 963 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 STAT2P52630 851 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 BTNL9Q6UXG8 535 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 ANKRD33Q7Z3H0 272 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 CHST13Q8NET6 341 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 TSEN34Q9BSV6 310 aaKnown RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 UPF3AQ9H1J1 476 aaKnown RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-207ENST00000588261 FAM184BQ9ULE4 1060 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 VCANP13611 3396 aa17.26■□□□□ 0.35
HDAC5-207ENST00000588261 KLF18A0A0U1RQI7 1052 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 ZBTB43O43298 467 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 SMARCA1P28370 1054 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 GNAQP50148 359 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 CDK7P50613 346 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-207ENST00000588261 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-207ENST00000588261 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
HDAC5-207ENST00000588261 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 PRR12Q9ULL5 1215 aa17.25■□□□□ 0.35
HDAC5-207ENST00000588261 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-207ENST00000588261 FOSL2P15408 326 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 MCM2P49736 904 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 AK2P54819 239 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 GJA9P57773 515 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms