RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
VMP1-206ENST00000587945 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
VMP1-206ENST00000587945 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
VMP1-206ENST00000587945 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
VMP1-206ENST00000587945 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 PSMC6P62333 389 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
VMP1-206ENST00000587945 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 MFSD5Q6N075 450 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 SLC43A3Q8NBI5 491 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 WDR11Q9BZH6 1224 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
VMP1-206ENST00000587945 TNKSO95271 1327 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 MCM3APO60318 1980 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 TLR3O15455 904 aaKnown RBP16.79■□□□□ 0.28
VMP1-206ENST00000587945 ZEB2O60315 1214 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 CD4P01730 458 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 ITGA7Q13683 1181 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
VMP1-206ENST00000587945 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 C16orf59Q7L2K0 433 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.289e-8■■■■■ 27.7
VMP1-206ENST00000587945 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 Q9Y3F1 56 aa16.79■□□□□ 0.28
VMP1-206ENST00000587945 CABYRO75952 493 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 ACRP10323 421 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 CSF2RAP15509 400 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 CYP2C18P33260 490 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 NT5C2P49902 561 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 PDE4DQ08499 809 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 KRT23Q9C075 422 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 TRPV6Q9H1D0 765 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
VMP1-206ENST00000587945 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
VMP1-206ENST00000587945 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 RBM47A0AV96 593 aaKnown RBP16.77■□□□□ 0.28
VMP1-206ENST00000587945 EDNRBP24530 442 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.282e-9■■□□□ 13.5
VMP1-206ENST00000587945 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
VMP1-206ENST00000587945 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 CYB5R4Q7L1T6 521 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 OR6J1Q8NGC5 347 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 COPS5Q92905 334 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 CDX2Q99626 313 aaPredicted RBP16.77■□□□□ 0.28
VMP1-206ENST00000587945 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.28
VMP1-206ENST00000587945 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
VMP1-206ENST00000587945 B4GALT4O60513 344 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 MYL3P08590 195 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 PARP1P09874 1014 aaKnown RBP16.76■□□□□ 0.27
VMP1-206ENST00000587945 PTH1RQ03431 593 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 QRICH1Q2TAL8 776 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 IFIT1BQ5T764 474 aaKnown RBP16.76■□□□□ 0.27
VMP1-206ENST00000587945 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 TMEM199Q8N511 208 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 DNERQ8NFT8 737 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 PPP1R13LQ8WUF5 828 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 JMJD4Q9H9V9 463 aa16.76■□□□□ 0.27
VMP1-206ENST00000587945 CHMLP26374 656 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 ZNF365Q70YC5 407 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
VMP1-206ENST00000587945 TAAR1Q96RJ0 339 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 HIPK3Q9H422 1215 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 COL20A1Q9P218 1284 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 TAF6LQ9Y6J9 622 aa16.75■□□□□ 0.27
VMP1-206ENST00000587945 ABCB11O95342 1321 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 LRRC37A2A6NM11 1700 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 GRXCR1A8MXD5 290 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 DLL1O00548 723 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 ARIH2O95376 493 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 CPT1AP50416 773 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 CCL23P55773 120 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 PURAQ00577 322 aaKnown RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 SEC23AQ15436 765 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 FBXO11Q86XK2 927 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 MYLIPQ8WY64 445 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 ALDH8A1Q9H2A2 487 aaPredicted RBP16.74■□□□□ 0.27
VMP1-206ENST00000587945 POLR3EQ9NVU0 708 aa16.74■□□□□ 0.27
VMP1-206ENST00000587945 RAD50Q92878 1312 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 LCTP09848 1927 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 CYP21A2P08686 494 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 TXNP10599 105 aaKnown RBP16.73■□□□□ 0.27
VMP1-206ENST00000587945 DNAJB2P25686 324 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 IL23AQ9NPF7 189 aa16.73■□□□□ 0.27
VMP1-206ENST00000587945 TRMT13Q9NUP7 481 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms