RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 PRDM6Q9NQX0 595 aa17.86■□□□□ 0.45
HDAC5-206ENST00000587776 GPHNQ9NQX3 736 aaPredicted RBP17.86■□□□□ 0.45
HDAC5-206ENST00000587776 POLR3EQ9NVU0 708 aa17.86■□□□□ 0.45
HDAC5-206ENST00000587776 GRIN2DO15399 1336 aa17.86■□□□□ 0.45
HDAC5-206ENST00000587776 VCANP13611 3396 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 NFIBO00712 420 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 MYL3P08590 195 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
HDAC5-206ENST00000587776 CALML3P27482 149 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 CPT1AP50416 773 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 CCDC85BQ15834 202 aaPredicted RBP17.85■□□□□ 0.45
HDAC5-206ENST00000587776 DUSP28Q4G0W2 176 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 AKNAD1Q5T1N1 836 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 OR6J1Q8NGC5 347 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 RAD50Q92878 1312 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 SCLYQ96I15 445 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 MPHOSPH6Q99547 160 aaKnown RBP17.85■□□□□ 0.45
HDAC5-206ENST00000587776 WNT8AQ9H1J5 351 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 ALDH8A1Q9H2A2 487 aaPredicted RBP17.85■□□□□ 0.45
HDAC5-206ENST00000587776 HELLSQ9NRZ9 838 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 THEGQ9P2T0 379 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 SLC4A7Q9Y6M7 1214 aa17.85■□□□□ 0.45
HDAC5-206ENST00000587776 SUPT20HL2P0C7V6 817 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 PDE4DQ08499 809 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
HDAC5-206ENST00000587776 FAM47CQ5HY64 1035 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 PPP2R2DQ66LE6 453 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 BTNL9Q6UXG8 535 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 TMEM47Q9BQJ4 181 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
HDAC5-206ENST00000587776 TNKSO95271 1327 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 SALL3Q9BXA9 1300 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 LOC102724159A0A0B4J2E5 919 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 RABGGTBP53611 331 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 PWP2Q15269 919 aaKnown RBP17.83■□□□□ 0.44
HDAC5-206ENST00000587776 ALX1Q15699 326 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 SLC30A10Q6XR72 485 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 RNF207Q6ZRF8 634 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 TRMT13Q9NUP7 481 aaKnown RBP17.83■□□□□ 0.44
HDAC5-206ENST00000587776 PNMA2Q9UL42 364 aa17.83■□□□□ 0.44
HDAC5-206ENST00000587776 YBX2Q9Y2T7 364 aaKnown RBP17.83■□□□□ 0.44
HDAC5-206ENST00000587776 TRIP12Q14669 1992 aaPredicted RBP17.82■□□□□ 0.44
HDAC5-206ENST00000587776 KIAA1217Q5T5P2 1943 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 TNFRSF10AO00220 468 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 FGAP02671 866 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 CYP2C9P11712 490 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 NOVP48745 357 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 HAND2P61296 217 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 PURAQ00577 322 aaKnown RBP17.82■□□□□ 0.44
HDAC5-206ENST00000587776 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 DEFB128Q7Z7B8 93 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 MICALL1Q8N3F8 863 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 ATXN2LQ8WWM7 1075 aaKnown RBP17.82■□□□□ 0.44
HDAC5-206ENST00000587776 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
HDAC5-206ENST00000587776 MTG1Q9BT17 334 aaPredicted RBP17.82■□□□□ 0.44
HDAC5-206ENST00000587776 PFKMP08237 780 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 FGRP09769 529 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 PDHBP11177 359 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 ATP2A2P16615 1042 aaKnown RBP17.81■□□□□ 0.44
HDAC5-206ENST00000587776 PDE1AP54750 535 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 TSPYL2Q9H2G4 693 aaPredicted RBP17.81■□□□□ 0.44
HDAC5-206ENST00000587776 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
HDAC5-206ENST00000587776 TCF20Q9UGU0 1960 aaKnown RBP17.8■□□□□ 0.44
HDAC5-206ENST00000587776 TRIM6-TRIM34B2RNG4 842 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 B4DLN1 442 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 NKRFO15226 690 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC5-206ENST00000587776 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
HDAC5-206ENST00000587776 ACTN1P12814 892 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
HDAC5-206ENST00000587776 CHMP4BP1P59074 171 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 MRPS5P82675 430 aaKnown RBP17.8■□□□□ 0.44
HDAC5-206ENST00000587776 USH1GQ495M9 461 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 MFSD6Q6ZSS7 791 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 SCFD2Q8WU76 684 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 ASB2Q96Q27 587 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 PCDHA11Q9Y5I1 949 aa17.8■□□□□ 0.44
HDAC5-206ENST00000587776 ZMYM6O95789 1325 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 RBM47A0AV96 593 aaKnown RBP17.79■□□□□ 0.44
HDAC5-206ENST00000587776 MYOGP15173 224 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 RPS6P62753 249 aaKnown RBP17.79■□□□□ 0.44
HDAC5-206ENST00000587776 ZNF543Q08ER8 600 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-206ENST00000587776 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 DNERQ8NFT8 737 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 CLEC4DQ8WXI8 215 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 RILPL2Q969X0 211 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 NOD1Q9Y239 953 aa17.79■□□□□ 0.44
HDAC5-206ENST00000587776 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
HDAC5-206ENST00000587776 SPTBN5Q9NRC6 3674 aaKnown RBP17.78■□□□□ 0.44
HDAC5-206ENST00000587776 TXNP10599 105 aaKnown RBP17.78■□□□□ 0.44
HDAC5-206ENST00000587776 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
HDAC5-206ENST00000587776 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms