RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GPATCH4Q5T3I0 446 aaKnown RBP22.03■■□□□ 1.12
TRIM47-205ENST00000587774 CXCL17Q6UXB2 119 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 DGKHQ86XP1 1220 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 FAM126BQ8IXS8 530 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 PNMA1Q8ND90 353 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 GUCD1Q96NT3 240 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 VCANP13611 3396 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 TIMP1P01033 207 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.12
TRIM47-205ENST00000587774 CALML3P27482 149 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 IMMTQ16891 758 aaKnown RBP22.02■■□□□ 1.12
TRIM47-205ENST00000587774 ZNF697Q5TEC3 545 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 RNF207Q6ZRF8 634 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 SLC17A8Q8NDX2 589 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 RNPC3Q96LT9 517 aaKnown RBP22.02■■□□□ 1.12
TRIM47-205ENST00000587774 AP5M1Q9H0R1 490 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 PNMA2Q9UL42 364 aa22.02■■□□□ 1.12
TRIM47-205ENST00000587774 DYNC1LI2O43237 492 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-205ENST00000587774 USH1GQ495M9 461 aa22.01■■□□□ 1.11
TRIM47-205ENST00000587774 TTC22Q5TAA0 569 aa22.01■■□□□ 1.11
TRIM47-205ENST00000587774 IQSEC1Q6DN90 963 aa22.01■■□□□ 1.11
TRIM47-205ENST00000587774 KIAA1211Q6ZU35 1233 aa22.01■■□□□ 1.11
TRIM47-205ENST00000587774 ENAHQ8N8S7 591 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-205ENST00000587774 ZSCAN10Q96SZ4 725 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-205ENST00000587774 TNKSO95271 1327 aa22.01■■□□□ 1.11
TRIM47-205ENST00000587774 LOC102724159A0A0B4J2E5 919 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
TRIM47-205ENST00000587774 SMAD3P84022 425 aaKnown RBP22■■□□□ 1.11
TRIM47-205ENST00000587774 PWP2Q15269 919 aaKnown RBP22■■□□□ 1.11
TRIM47-205ENST00000587774 UBA5Q9GZZ9 404 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 KAT14Q9H8E8 782 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 ZSWIM5Q9P217 1185 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 Q9Y3F1 56 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 PTPRSQ13332 1948 aa22■■□□□ 1.11
TRIM47-205ENST00000587774 CHD7Q9P2D1 2997 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 TLR3O15455 904 aaKnown RBP21.99■■□□□ 1.11
TRIM47-205ENST00000587774 CD4P01730 458 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 CDC37Q16543 378 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-205ENST00000587774 DUSP28Q4G0W2 176 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 CCDC178Q5BJE1 867 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 MFSD5Q6N075 450 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 SLC43A3Q8NBI5 491 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 ANKS1AQ92625 1134 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 PPP1R12CQ9BZL4 782 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 CTNNA3Q9UI47 895 aa21.99■■□□□ 1.11
TRIM47-205ENST00000587774 CABYRO75952 493 aa21.98■■□□□ 1.11
TRIM47-205ENST00000587774 IRX6P78412 446 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-205ENST00000587774 KRT23Q9C075 422 aa21.98■■□□□ 1.11
TRIM47-205ENST00000587774 REV3LO60673 3130 aa21.98■■□□□ 1.11
TRIM47-205ENST00000587774 GRIN2DO15399 1336 aa21.98■■□□□ 1.11
TRIM47-205ENST00000587774 RAD50Q92878 1312 aa21.98■■□□□ 1.11
TRIM47-205ENST00000587774 ZEB2O60315 1214 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 EDNRBP24530 442 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 ITGA7Q13683 1181 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 ASPRV1Q53RT3 343 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 ADGRF4Q8IZF3 695 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.97■■□□□ 1.115e-7■□□□□ 9.4
TRIM47-205ENST00000587774 WDR11Q9BZH6 1224 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 CNNM2Q9H8M5 875 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 TET1Q8NFU7 2136 aa21.97■■□□□ 1.11
TRIM47-205ENST00000587774 RBM47A0AV96 593 aaKnown RBP21.96■■□□□ 1.11
TRIM47-205ENST00000587774 CSF2RAP15509 400 aa21.96■■□□□ 1.11
TRIM47-205ENST00000587774 PSMC6P62333 389 aa21.96■■□□□ 1.11
TRIM47-205ENST00000587774 PDE4DQ08499 809 aa21.96■■□□□ 1.11
TRIM47-205ENST00000587774 PPIGQ13427 754 aaKnown RBP eCLIP21.96■■□□□ 1.115e-7■■■■□ 25.7
TRIM47-205ENST00000587774 DNERQ8NFT8 737 aa21.96■■□□□ 1.11
TRIM47-205ENST00000587774 UBAC1Q9BSL1 405 aa21.96■■□□□ 1.11
TRIM47-205ENST00000587774 TTYH1Q9H313 450 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-205ENST00000587774 TRANK1O15050 2925 aa21.95■■□□□ 1.1
TRIM47-205ENST00000587774 MPHOSPH6Q99547 160 aaKnown RBP21.95■■□□□ 1.1
TRIM47-205ENST00000587774 ABCB11O95342 1321 aa21.95■■□□□ 1.1
TRIM47-205ENST00000587774 PARP1P09874 1014 aaKnown RBP21.94■■□□□ 1.1
TRIM47-205ENST00000587774 CYP2C18P33260 490 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 PPP2R5BQ15173 497 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 QRICH1Q2TAL8 776 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 C16orf59Q7L2K0 433 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 TMEM199Q8N511 208 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 OR6J1Q8NGC5 347 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 SEMA6BQ9H3T3 888 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 UMODL1Q5DID0 1318 aa21.94■■□□□ 1.1
TRIM47-205ENST00000587774 DHX16O60231 1041 aaKnown RBP21.93■■□□□ 1.1
TRIM47-205ENST00000587774 B4GALT4O60513 344 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 CPT1AP50416 773 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 PURAQ00577 322 aaKnown RBP21.93■■□□□ 1.1
TRIM47-205ENST00000587774 SEC23AQ15436 765 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 TMEM240Q5SV17 173 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 IFIT1BQ5T764 474 aaKnown RBP21.93■■□□□ 1.1
TRIM47-205ENST00000587774 CYB5R4Q7L1T6 521 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 RGS22Q8NE09 1264 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 TBC1D5Q92609 795 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 CDX2Q99626 313 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-205ENST00000587774 TRPV6Q9H1D0 765 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 HIPK3Q9H422 1215 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 COL20A1Q9P218 1284 aa21.93■■□□□ 1.1
TRIM47-205ENST00000587774 ACRP10323 421 aa21.92■■□□□ 1.1
TRIM47-205ENST00000587774 SCFD2Q8WU76 684 aa21.92■■□□□ 1.1
TRIM47-205ENST00000587774 SEZ6LQ9BYH1 1024 aa21.92■■□□□ 1.1
TRIM47-205ENST00000587774 JMJD4Q9H9V9 463 aa21.92■■□□□ 1.1
TRIM47-205ENST00000587774 POLR3EQ9NVU0 708 aa21.92■■□□□ 1.1
TRIM47-205ENST00000587774 CYP21A2P08686 494 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms