RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 USP38Q8NB14 1042 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 EVI5LQ96CN4 794 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 CRBNQ96SW2 442 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 ZNF576Q9H609 170 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 CYP39A1Q9NYL5 469 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 GNEQ9Y223 722 aaKnown RBP7.58□□□□□ -1.2
SDF2-205ENST00000587629 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 CUL9Q8IWT3 2517 aa7.58□□□□□ -1.2
SDF2-205ENST00000587629 VCANP13611 3396 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 GRIN2DO15399 1336 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 MCM3APO60318 1980 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 A0A0D9SFI3 127 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PTPDC1A2A3K4 754 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 NFIBO00712 420 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PLA2G6O60733 806 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 CD4P01730 458 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 FGAP02671 866 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 ICAM1P05362 532 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 CALML3P27482 149 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PDE1AP54750 535 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 CCDC85BQ15834 202 aaPredicted RBP7.57□□□□□ -1.2
SDF2-205ENST00000587629 PPP4R3BQ5MIZ7 849 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 SYDE2Q5VT97 1194 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 IQSEC1Q6DN90 963 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 OTOP2Q7RTS6 562 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 DCAF4Q8WV16 495 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 TMEM47Q9BQJ4 181 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PBX4Q9BYU1 374 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 HIPK3Q9H422 1215 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PRDM12Q9H4Q4 367 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 IL23AQ9NPF7 189 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 PRDM6Q9NQX0 595 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 HELLSQ9NRZ9 838 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 CXXC1Q9P0U4 656 aaPredicted RBP7.57□□□□□ -1.2
SDF2-205ENST00000587629 ANAPC4Q9UJX5 808 aa7.57□□□□□ -1.2
SDF2-205ENST00000587629 SALL3Q9BXA9 1300 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 TMEM265A0A087WTH1 108 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 TRIM6-TRIM34B2RNG4 842 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 ORC4O43929 436 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 ZEB2O60315 1214 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 B4GALT4O60513 344 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 CABYRO75952 493 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 FGBP02675 491 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 MYL3P08590 195 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 RABGGTBP53611 331 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 CHMP4BP1P59074 171 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 NKX3-2P78367 333 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 NMIQ13287 307 aaPredicted RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 MCMDC2Q4G0Z9 681 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 PSRC1Q6PGN9 363 aaPredicted RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 ZNF589Q86UQ0 364 aaPredicted RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 SLC43A3Q8NBI5 491 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 RILPL2Q969X0 211 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 SCLYQ96I15 445 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 WDR11Q9BZH6 1224 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 RANBP17Q9H2T7 1088 aaKnown RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 NKX2-4Q9H2Z4 354 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 CPVLQ9H3G5 476 aa7.56□□□□□ -1.2
SDF2-205ENST00000587629 TRMT13Q9NUP7 481 aaKnown RBP7.56□□□□□ -1.2
SDF2-205ENST00000587629 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 HSPD1P10809 573 aaKnown RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 CYP2C9P11712 490 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 MYOGP15173 224 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 IGFBP4P22692 258 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 NOVP48745 357 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 ALDH5A1P51649 535 aaPredicted RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 PDE4DQ08499 809 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 ALX1Q15699 326 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 USH1GQ495M9 461 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 FAM47CQ5HY64 1035 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 RASIP1Q5U651 963 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 BTNL9Q6UXG8 535 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 RNF207Q6ZRF8 634 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 RASEFQ8IZ41 740 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 CLEC4DQ8WXI8 215 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 MARVELD3Q96A59 401 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 NOC4LQ9BVI4 516 aaKnown RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 WNT8AQ9H1J5 351 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 ADD3Q9UEY8 706 aaKnown RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 MSRAQ9UJ68 235 aa7.55□□□□□ -1.2
SDF2-205ENST00000587629 YBX2Q9Y2T7 364 aaKnown RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 SPTBN5Q9NRC6 3674 aaKnown RBP7.55□□□□□ -1.2
SDF2-205ENST00000587629 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 FGRP09769 529 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 PDHBP11177 359 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 ADGRE1Q14246 886 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 DUSP28Q4G0W2 176 aa7.54□□□□□ -1.2
SDF2-205ENST00000587629 AKNAD1Q5T1N1 836 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms