RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 DUSP28Q4G0W2 176 aa19.32■□□□□ 0.68
NPC1-205ENST00000587163 PPP4R3BQ5MIZ7 849 aa19.32■□□□□ 0.68
NPC1-205ENST00000587163 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
NPC1-205ENST00000587163 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
NPC1-205ENST00000587163 TRMT13Q9NUP7 481 aaKnown RBP19.32■□□□□ 0.68
NPC1-205ENST00000587163 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
NPC1-205ENST00000587163 NFIBO00712 420 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 CYP2C9P11712 490 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 CCDC96Q2M329 555 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 RPUSD2Q8IZ73 545 aaKnown RBP19.31■□□□□ 0.68
NPC1-205ENST00000587163 WDR11Q9BZH6 1224 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 ANAPC4Q9UJX5 808 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 REV3LO60673 3130 aa19.31■□□□□ 0.68
NPC1-205ENST00000587163 ALDH5A1P51649 535 aaPredicted RBP19.3■□□□□ 0.68
NPC1-205ENST00000587163 MRPS5P82675 430 aaKnown RBP19.3■□□□□ 0.68
NPC1-205ENST00000587163 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
NPC1-205ENST00000587163 ADAMTS19Q8TE59 1207 aa19.3■□□□□ 0.68
NPC1-205ENST00000587163 PPP1R13LQ8WUF5 828 aa19.3■□□□□ 0.68
NPC1-205ENST00000587163 DCAF4Q8WV16 495 aa19.3■□□□□ 0.68
NPC1-205ENST00000587163 RBM47A0AV96 593 aaKnown RBP19.29■□□□□ 0.68
NPC1-205ENST00000587163 ZBBXA8MT70 800 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 ORC4O43929 436 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 FGRP09769 529 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 MX1P20591 662 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 COL9A1P20849 921 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 PURAQ00577 322 aaKnown RBP19.29■□□□□ 0.68
NPC1-205ENST00000587163 TTLL4Q14679 1199 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 PPP2R2DQ66LE6 453 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 GPCPD1Q9NPB8 672 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 PCDHA11Q9Y5I1 949 aa19.29■□□□□ 0.68
NPC1-205ENST00000587163 TNKSO95271 1327 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 FRMPD2Q68DX3 1309 aaPredicted RBP19.28■□□□□ 0.68
NPC1-205ENST00000587163 MYL3P08590 195 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 ATP2A2P16615 1042 aaKnown RBP19.28■□□□□ 0.68
NPC1-205ENST00000587163 SYDE2Q5VT97 1194 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 SLC30A10Q6XR72 485 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 CLEC4DQ8WXI8 215 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 TMEM47Q9BQJ4 181 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 POLR3EQ9NVU0 708 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 ADD3Q9UEY8 706 aaKnown RBP19.28■□□□□ 0.68
NPC1-205ENST00000587163 RAPGEFL1Q9UHV5 662 aa19.28■□□□□ 0.68
NPC1-205ENST00000587163 SALL3Q9BXA9 1300 aa19.27■□□□□ 0.68
NPC1-205ENST00000587163 SCN5AQ14524 2016 aa19.27■□□□□ 0.68
NPC1-205ENST00000587163 PTPDC1A2A3K4 754 aa19.27■□□□□ 0.68
NPC1-205ENST00000587163 RFXAPO00287 272 aa19.27■□□□□ 0.68
NPC1-205ENST00000587163 UHRF1Q96T88 793 aaPredicted RBP19.27■□□□□ 0.68
NPC1-205ENST00000587163 SUPT20HL2P0C7V6 817 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 CALML3P27482 149 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 ALX1Q15699 326 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 NBPF20Q3BBV1 942 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 RRP12Q5JTH9 1297 aaKnown RBP19.26■□□□□ 0.67
NPC1-205ENST00000587163 MICALL1Q8N3F8 863 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 OR6J1Q8NGC5 347 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 MTG1Q9BT17 334 aaPredicted RBP19.26■□□□□ 0.67
NPC1-205ENST00000587163 XIRP2A4UGR9 3374 aa19.26■□□□□ 0.67
NPC1-205ENST00000587163 LOC102724159A0A0B4J2E5 919 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 FGAP02671 866 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
NPC1-205ENST00000587163 CPT1AP50416 773 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 TFF2Q03403 129 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 PWP2Q15269 919 aaKnown RBP19.25■□□□□ 0.67
NPC1-205ENST00000587163 COPS5Q92905 334 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 NECAB3Q96P71 396 aaPredicted RBP19.25■□□□□ 0.67
NPC1-205ENST00000587163 TOMM22Q9NS69 142 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 BDP1A6H8Y1 2624 aa19.25■□□□□ 0.67
NPC1-205ENST00000587163 TRANK1O15050 2925 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 CA3P07451 260 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 PFKMP08237 780 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 PDHBP11177 359 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 BMP1P13497 986 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 FAM47CQ5HY64 1035 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 TMEM67Q5HYA8 995 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 FAM227BQ96M60 508 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 CERS4Q9HA82 394 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 GPHNQ9NQX3 736 aaPredicted RBP19.24■□□□□ 0.67
NPC1-205ENST00000587163 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
NPC1-205ENST00000587163 TCF20Q9UGU0 1960 aaKnown RBP19.23■□□□□ 0.67
NPC1-205ENST00000587163 SCN10AQ9Y5Y9 1956 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 EPOPA6NHQ4 379 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 A6NJR5 290 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 IQCF3P0C7M6 154 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 EDNRBP24530 442 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 RPS6P62753 249 aaKnown RBP19.23■□□□□ 0.67
NPC1-205ENST00000587163 PDE4DQ08499 809 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 EVI5LQ96CN4 794 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 HELLSQ9NRZ9 838 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 MTCH2Q9Y6C9 303 aa19.23■□□□□ 0.67
NPC1-205ENST00000587163 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
NPC1-205ENST00000587163 ARHGEF15O94989 841 aa19.22■□□□□ 0.67
NPC1-205ENST00000587163 ZNF543Q08ER8 600 aa19.22■□□□□ 0.67
NPC1-205ENST00000587163 NFRKBQ6P4R8 1299 aa19.22■□□□□ 0.67
NPC1-205ENST00000587163 IL27Q8NEV9 243 aa19.22■□□□□ 0.67
NPC1-205ENST00000587163 TSPYL2Q9H2G4 693 aaPredicted RBP19.22■□□□□ 0.67
NPC1-205ENST00000587163 NCOR1O75376 2440 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 NKRFO15226 690 aaKnown RBP eCLIP19.21■□□□□ 0.67
NPC1-205ENST00000587163 ARIH2O95376 493 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 TXNP10599 105 aaKnown RBP19.21■□□□□ 0.67
NPC1-205ENST00000587163 HSPD1P10809 573 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms