RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 PURBQ96QR8 312 aaKnown RBP9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 TMEM47Q9BQJ4 181 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 TRPV6Q9H1D0 765 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 PRDM12Q9H4Q4 367 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 POLR3EQ9NVU0 708 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 CXXC1Q9P0U4 656 aaPredicted RBP9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 DDX49Q9Y6V7 483 aaKnown RBP9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 ZMYM6O95789 1325 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 MCM3APO60318 1980 aa9.46□□□□□ -0.9
CAPNS1-203ENST00000586963 NFIBO00712 420 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 NKRFO15226 690 aaKnown RBP eCLIP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PFKMP08237 780 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 SNHG28P0DPA3 235 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PDHBP11177 359 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PTGS1P23219 599 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 NT5C2P49902 561 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 CPT1AP50416 773 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 CCL23P55773 120 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PSMC6P62333 389 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 OTOP2Q7RTS6 562 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 RGS22Q8NE09 1264 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 DNERQ8NFT8 737 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 ATXN2LQ8WWM7 1075 aaKnown RBP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 CLEC4DQ8WXI8 215 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 FAM227BQ96M60 508 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 MAF1Q9H063 256 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 WNT8AQ9H1J5 351 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 SLC28A3Q9HAS3 691 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 TOMM22Q9NS69 142 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 UMODL1Q5DID0 1318 aa9.45□□□□□ -0.9
CAPNS1-203ENST00000586963 A0A0D9SFI3 127 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 A6NJR5 290 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 B4DLN1 442 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 KPNA6O60684 536 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 EDNRBP24530 442 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 MRPL12P52815 198 aaKnown RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 RPS6P62753 249 aaKnown RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 ZNF543Q08ER8 600 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 BRDTQ58F21 947 aaPredicted RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 RRP12Q5JTH9 1297 aaKnown RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 RNF207Q6ZRF8 634 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 MTG1Q9BT17 334 aaPredicted RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 YBX2Q9Y2T7 364 aaKnown RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 SLC4A7Q9Y6M7 1214 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 FRMPD2Q68DX3 1309 aaPredicted RBP9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
CAPNS1-203ENST00000586963 TNKSO95271 1327 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 RAD50Q92878 1312 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 CALML3P27482 149 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 RFC2P35250 354 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 RRP1P56182 461 aaKnown RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 PTPN11Q06124 597 aaPredicted RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 PDE4DQ08499 809 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 SLC30A10Q6XR72 485 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 MFSD6Q6ZSS7 791 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 ZNF589Q86UQ0 364 aaPredicted RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 SCLYQ96I15 445 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 ASB2Q96Q27 587 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 PCDHA11Q9Y5I1 949 aa9.43□□□□□ -0.9
CAPNS1-203ENST00000586963 XIRP2A4UGR9 3374 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 CCDC171Q6TFL3 1326 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 MYL3P08590 195 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 CYP2C9P11712 490 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 IGFBP4P22692 258 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 HAND2P61296 217 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 MRPS5P82675 430 aaKnown RBP9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 NMIQ13287 307 aaPredicted RBP9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 ESR2Q92731 530 aa9.42□□□□□ -0.9
CAPNS1-203ENST00000586963 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
CAPNS1-203ENST00000586963 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms