RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 BTNL9Q6UXG8 535 aa23.11■■□□□ 1.29
PTBP1-208ENST00000585956 KIAA1211Q6ZU35 1233 aa23.11■■□□□ 1.29
PTBP1-208ENST00000585956 DCAF4Q8WV16 495 aa23.11■■□□□ 1.29
PTBP1-208ENST00000585956 AP5M1Q9H0R1 490 aa23.11■■□□□ 1.29
PTBP1-208ENST00000585956 FGAP02671 866 aa23.1■■□□□ 1.29
PTBP1-208ENST00000585956 CYP2C9P11712 490 aa23.1■■□□□ 1.29
PTBP1-208ENST00000585956 CCDC85BQ15834 202 aaPredicted RBP23.1■■□□□ 1.29
PTBP1-208ENST00000585956 RRP12Q5JTH9 1297 aaKnown RBP23.1■■□□□ 1.29
PTBP1-208ENST00000585956 SYDE2Q5VT97 1194 aa23.1■■□□□ 1.29
PTBP1-208ENST00000585956 IQSEC1Q6DN90 963 aa23.1■■□□□ 1.29
PTBP1-208ENST00000585956 ALDH8A1Q9H2A2 487 aaPredicted RBP23.1■■□□□ 1.29
PTBP1-208ENST00000585956 VTA1Q9NP79 307 aa23.1■■□□□ 1.29
PTBP1-208ENST00000585956 FGBP02675 491 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 HAND2P61296 217 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 ALX1Q15699 326 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 DUSP28Q4G0W2 176 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 ANKRD45Q5TZF3 282 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 COPS5Q92905 334 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 CPVLQ9H3G5 476 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
PTBP1-208ENST00000585956 CABYRO75952 493 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 PDHBP11177 359 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 PDE1AP54750 535 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 TBC1D10CQ8IV04 446 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 CRBNQ96SW2 442 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 Q9Y3F1 56 aa23.08■■□□□ 1.29
PTBP1-208ENST00000585956 PURAQ00577 322 aaKnown RBP23.07■■□□□ 1.28
PTBP1-208ENST00000585956 NMIQ13287 307 aaPredicted RBP23.07■■□□□ 1.28
PTBP1-208ENST00000585956 TTLL4Q14679 1199 aa23.07■■□□□ 1.28
PTBP1-208ENST00000585956 TJAP1Q5JTD0 557 aa23.07■■□□□ 1.28
PTBP1-208ENST00000585956 EVI5LQ96CN4 794 aa23.07■■□□□ 1.28
PTBP1-208ENST00000585956 WDR11Q9BZH6 1224 aa23.07■■□□□ 1.28
PTBP1-208ENST00000585956 TOMM22Q9NS69 142 aa23.07■■□□□ 1.28
PTBP1-208ENST00000585956 RBM47A0AV96 593 aaKnown RBP23.06■■□□□ 1.28
PTBP1-208ENST00000585956 PTPDC1A2A3K4 754 aa23.06■■□□□ 1.28
PTBP1-208ENST00000585956 ARHGEF15O94989 841 aa23.06■■□□□ 1.28
PTBP1-208ENST00000585956 HSPD1P10809 573 aaKnown RBP23.06■■□□□ 1.28
PTBP1-208ENST00000585956 TOP1P11387 765 aaKnown RBP23.06■■□□□ 1.28
PTBP1-208ENST00000585956 CALML3P27482 149 aa23.06■■□□□ 1.28
PTBP1-208ENST00000585956 HELLSQ9NRZ9 838 aa23.06■■□□□ 1.28
PTBP1-208ENST00000585956 TET1Q8NFU7 2136 aa23.06■■□□□ 1.28
PTBP1-208ENST00000585956 ARIH2O95376 493 aa23.05■■□□□ 1.28
PTBP1-208ENST00000585956 MYL3P08590 195 aa23.05■■□□□ 1.28
PTBP1-208ENST00000585956 GAS2L1Q99501 681 aaPredicted RBP23.05■■□□□ 1.28
PTBP1-208ENST00000585956 NEDD4P46934 1319 aa23.05■■□□□ 1.28
PTBP1-208ENST00000585956 BDP1A6H8Y1 2624 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 GOLGA8HP0CJ92 632 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 IGFBP4P22692 258 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 EDNRBP24530 442 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
PTBP1-208ENST00000585956 ZNF543Q08ER8 600 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 AKNAD1Q5T1N1 836 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 TBC1D5Q92609 795 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 TCP11L1Q9NUJ3 509 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 MSRAQ9UJ68 235 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 TNKSO95271 1327 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 PTPRSQ13332 1948 aa23.04■■□□□ 1.28
PTBP1-208ENST00000585956 RFXAPO00287 272 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 ZEB2O60315 1214 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 SNHG28P0DPA3 235 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 RPS6P62753 249 aaKnown RBP23.03■■□□□ 1.28
PTBP1-208ENST00000585956 RAB30Q15771 203 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 MCMDC2Q4G0Z9 681 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 PPP4R3BQ5MIZ7 849 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 DEFB128Q7Z7B8 93 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 OR6J1Q8NGC5 347 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 ZKSCAN3Q9BRR0 538 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 RAPGEFL1Q9UHV5 662 aa23.03■■□□□ 1.28
PTBP1-208ENST00000585956 TANC1Q9C0D5 1861 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 EPOPA6NHQ4 379 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 NBPF20Q3BBV1 942 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 RNF207Q6ZRF8 634 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 SPRED2Q7Z698 418 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 UBA5Q9GZZ9 404 aa23.02■■□□□ 1.28
PTBP1-208ENST00000585956 PRRC2BQ5JSZ5 2229 aaKnown RBP23.01■■□□□ 1.27
PTBP1-208ENST00000585956 SYMPKQ92797 1274 aaKnown RBP23.01■■□□□ 1.27
PTBP1-208ENST00000585956 CTAGE1Q96RT6 745 aa23.01■■□□□ 1.27
PTBP1-208ENST00000585956 SLC28A3Q9HAS3 691 aa23.01■■□□□ 1.27
PTBP1-208ENST00000585956 COL20A1Q9P218 1284 aa23.01■■□□□ 1.27
PTBP1-208ENST00000585956 SLC4A7Q9Y6M7 1214 aa23.01■■□□□ 1.27
PTBP1-208ENST00000585956 TCF20Q9UGU0 1960 aaKnown RBP23.01■■□□□ 1.27
PTBP1-208ENST00000585956 NCOR1O75376 2440 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 ZBBXA8MT70 800 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 USH1GQ495M9 461 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 KRT40Q6A162 431 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 NECAB3Q96P71 396 aaPredicted RBP23■■□□□ 1.27
PTBP1-208ENST00000585956 ASB2Q96Q27 587 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 THEGQ9P2T0 379 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 ADD3Q9UEY8 706 aaKnown RBP23■■□□□ 1.27
PTBP1-208ENST00000585956 LAMA4Q16363 1823 aa23■■□□□ 1.27
PTBP1-208ENST00000585956 TNFRSF10AO00220 468 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 PPP2R2DQ66LE6 453 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 MTG1Q9BT17 334 aaPredicted RBP22.99■■□□□ 1.27
PTBP1-208ENST00000585956 LNPKQ9C0E8 428 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 CERS4Q9HA82 394 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 TRIP12Q14669 1992 aaPredicted RBP22.99■■□□□ 1.27
PTBP1-208ENST00000585956 ZMYM6O95789 1325 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 CCDC171Q6TFL3 1326 aa22.99■■□□□ 1.27
PTBP1-208ENST00000585956 ATP2A2P16615 1042 aaKnown RBP22.98■■□□□ 1.27
PTBP1-208ENST00000585956 TFF2Q03403 129 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms