RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 FOSL2P15408 326 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 SMPD1P17405 629 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 MRPL12P52815 198 aaKnown RBP12.45□□□□□ -0.42
MBD3-203ENST00000585903 ITGA7Q13683 1181 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 CCDC96Q2M329 555 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 MFSD6Q6ZSS7 791 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 C16orf59Q7L2K0 433 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 HERVK_113Q902F9 699 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 IL23AQ9NPF7 189 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
MBD3-203ENST00000585903 RAD50Q92878 1312 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 KPNA6O60684 536 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 SUPT20HL2P0C7V6 817 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 CSF2RAP15509 400 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 EDNRBP24530 442 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 CPT1AP50416 773 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
MBD3-203ENST00000585903 ZNF543Q08ER8 600 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 RAB30Q15771 203 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
MBD3-203ENST00000585903 CXCL17Q6UXB2 119 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 NSMFQ6X4W1 530 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 NOL8Q76FK4 1167 aaKnown RBP12.44□□□□□ -0.42
MBD3-203ENST00000585903 ESR2Q92731 530 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 ZNF576Q9H609 170 aa12.44□□□□□ -0.42
MBD3-203ENST00000585903 HIP1O00291 1037 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 BEX3Q00994 111 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 PTPN11Q06124 597 aaPredicted RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 BAATQ14032 418 aaPredicted RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 CLEC4DQ8WXI8 215 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 NOC4LQ9BVI4 516 aaKnown RBP12.43□□□□□ -0.42
MBD3-203ENST00000585903 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
MBD3-203ENST00000585903 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 GRIN2DO15399 1336 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 NFIBO00712 420 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
MBD3-203ENST00000585903 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
MBD3-203ENST00000585903 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
MBD3-203ENST00000585903 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
MBD3-203ENST00000585903 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 PBX4Q9BYU1 374 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 WDR11Q9BZH6 1224 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
MBD3-203ENST00000585903 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 NCOR1O75376 2440 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 TRANK1O15050 2925 aa12.42□□□□□ -0.42
MBD3-203ENST00000585903 MYH6P13533 1939 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 A6NJR5 290 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 B4GALT4O60513 344 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 FGBP02675 491 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 SDSP20132 328 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 RFC2P35250 354 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 SLC16A2P36021 539 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 PURAQ00577 322 aaKnown RBP12.41□□□□□ -0.42
MBD3-203ENST00000585903 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
MBD3-203ENST00000585903 TTBK2Q6IQ55 1244 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 KIAA1217Q5T5P2 1943 aa12.41□□□□□ -0.42
MBD3-203ENST00000585903 GBF1Q92538 1859 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 ZNF213O14771 459 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 CYP2C18P33260 490 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 SNAP25P60880 206 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
MBD3-203ENST00000585903 PDE4DQ08499 809 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 ASPRV1Q53RT3 343 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
MBD3-203ENST00000585903 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
MBD3-203ENST00000585903 DSCC1Q9BVC3 393 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
MBD3-203ENST00000585903 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms