RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	PBX4	Q9BYU1	374 aa		19.26	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	WDR11	Q9BZH6	1224 aa		19.26	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	HIPK3	Q9H422	1215 aa		19.26	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	ZMYM6	O95789	1325 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CCDC171	Q6TFL3	1326 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PTPDC1	A2A3K4	754 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	B4GALT4	O60513	344 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	FGB	P02675	491 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	SNHG28	P0DPA3	235 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	SDS	P20132	328 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	B4GALNT3	Q6L9W6	998 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PSRC1	Q6PGN9	363 aa	Predicted RBP	19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	TBC1D10C	Q8IV04	446 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	SMC5	Q8IY18	1101 aa		19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	NOC4L	Q9BVI4	516 aa	Known RBP	19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CXXC1	Q9P0U4	656 aa	Predicted RBP	19.25	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	LOC102724159	A0A0B4J2E5	919 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PC	P11498	1178 aa	Known RBP	19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CALML3	P27482	149 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CCL23	P55773	120 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PWP2	Q15269	919 aa	Known RBP	19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	SLC30A10	Q6XR72	485 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	RNF207	Q6ZRF8	634 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PLEKHM2	Q8IWE5	1019 aa		19.24	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	IGHD	P01880	384 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	RPS6	P62753	249 aa	Known RBP	19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	VWCE	Q96DN2	955 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	ZKSCAN3	Q9BRR0	538 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	UBA5	Q9GZZ9	404 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	RWDD1	Q9H446	243 aa	Predicted RBP	19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PNMA2	Q9UL42	364 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	MCM3AP	O60318	1980 aa		19.23	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	GOLGA8H	P0CJ92	632 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CHD1L	Q86WJ1	897 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	DGKH	Q86XP1	1220 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	ESR2	Q92731	530 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	WNT8A	Q9H1J5	351 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	OSBPL3	Q9H4L5	887 aa		19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	RNF41	Q9H4P4	317 aa	Predicted RBP	19.22	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	ZNF213	O14771	459 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	EDNRB	P24530	442 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	MFAP1	P55081	439 aa	Known RBP	19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	PURA	Q00577	322 aa	Known RBP	19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	AAMP	Q13685	434 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	OTOP2	Q7RTS6	562 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	USP38	Q8NB14	1042 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	RGS22	Q8NE09	1264 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	TBC1D5	Q92609	795 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	CPVL	Q9H3G5	476 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	TRMT13	Q9NUP7	481 aa	Known RBP	19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	POLR3E	Q9NVU0	708 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	WDR19	Q8NEZ3	1342 aa		19.21	■□□□□ 0.67
PRKAR1A-206	ENST00000585460	MYL3	P08590	195 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	NUCB1	Q02818	461 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PDE4D	Q08499	809 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	GPATCH4	Q5T3I0	446 aa	Known RBP	19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	DNER	Q8NFT8	737 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	OR6J1	Q8NGC5	347 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	ANKS1A	Q92625	1134 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	COPS5	Q92905	334 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	SCLY	Q96I15	445 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PRDM12	Q9H4Q4	367 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	MSRA	Q9UJ68	235 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	NEDD4	P46934	1319 aa		19.2	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	SUPT20HL2	P0C7V6	817 aa		19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	CYP2C9	P11712	490 aa		19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	CPT1A	P50416	773 aa		19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	NBPF20	Q3BBV1	942 aa		19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	CWC27	Q6UX04	472 aa	Known RBP	19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	RPUSD2	Q8IZ73	545 aa	Known RBP	19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	MTG1	Q9BT17	334 aa	Predicted RBP	19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	MTIF3	Q9H2K0	278 aa	Known RBP	19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	GPHN	Q9NQX3	736 aa	Predicted RBP	19.19	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	EYS	Q5T1H1	3165 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PRUNE2	Q8WUY3	3088 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460		A6NJR5	290 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	NKRF	O15226	690 aa	Known RBP eCLIP	19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	KDM4A	O75164	1064 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	ADGRE1	Q14246	886 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	RAB30	Q15771	203 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	USH1G	Q495M9	461 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	SCFD2	Q8WU76	684 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PPP1R13L	Q8WUF5	828 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	NKX2-4	Q9H2Z4	354 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	ZSWIM5	Q9P217	1185 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	YBX2	Q9Y2T7	364 aa	Known RBP	19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	CDH23	Q9H251	3354 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	TNKS	O95271	1327 aa		19.18	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	TXN	P10599	105 aa	Known RBP	19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PPP2R5B	Q15173	497 aa		19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	CCDC178	Q5BJE1	867 aa		19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	ADGRF4	Q8IZF3	695 aa		19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PNMA1	Q8ND90	353 aa		19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	MPHOSPH6	Q99547	160 aa	Known RBP	19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	PRDM6	Q9NQX0	595 aa		19.17	■□□□□ 0.66
PRKAR1A-206	ENST00000585460		B4DLN1	442 aa		19.16	■□□□□ 0.66
PRKAR1A-206	ENST00000585460		B4E1Z4	1266 aa		19.16	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	KPNA6	O60684	536 aa		19.16	■□□□□ 0.66
PRKAR1A-206	ENST00000585460	ARIH2	O95376	493 aa		19.16	■□□□□ 0.66

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms