RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
SAFB2-202ENST00000585449 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 PIBF1Q8WXW3 757 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 TAAR1Q96RJ0 339 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
SAFB2-202ENST00000585449 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
SAFB2-202ENST00000585449 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
SAFB2-202ENST00000585449 A0A1W2PQ45 241 aaPredicted RBP12.39□□□□□ -0.43
SAFB2-202ENST00000585449 A0A1W2PQY0 241 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 ZBTB5O15062 677 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 CTAGE5O15320 804 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 DYNC1LI2O43237 492 aaPredicted RBP12.39□□□□□ -0.43
SAFB2-202ENST00000585449 RXRAP19793 462 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 RNF20Q5VTR2 975 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 IQSEC1Q6DN90 963 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 NFXL1Q6ZNB6 911 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
SAFB2-202ENST00000585449 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 TCEANC2Q96MN5 208 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 GDF15Q99988 308 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
SAFB2-202ENST00000585449 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 UPF3AQ9H1J1 476 aaKnown RBP12.39□□□□□ -0.43
SAFB2-202ENST00000585449 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 LCTP09848 1927 aa12.39□□□□□ -0.43
SAFB2-202ENST00000585449 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 OPLAHO14841 1288 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 CFBP00751 764 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 ASGR1P07306 291 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 MAGEA10P43363 369 aaPredicted RBP12.38□□□□□ -0.43
SAFB2-202ENST00000585449 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
SAFB2-202ENST00000585449 TLE2Q04725 743 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 PDE4DQ08499 809 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 SNX17Q15036 470 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 CMTR1Q8N1G2 835 aaKnown RBP12.38□□□□□ -0.43
SAFB2-202ENST00000585449 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 SPC25Q9HBM1 224 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
SAFB2-202ENST00000585449 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 MOXD2PA6NHM9 499 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 DDAH1O94760 285 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 CPA1P15085 419 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 EDNRBP24530 442 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 LIFRP42702 1097 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 EXOSC10Q01780 885 aaKnown RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 SH3RF1Q7Z6J0 888 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
SAFB2-202ENST00000585449 VTI1AQ96AJ9 217 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
SAFB2-202ENST00000585449 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 RBM47A0AV96 593 aaKnown RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 HOXA13P31271 388 aaPredicted RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 FXR1P51114 621 aaKnown RBP eCLIP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 NKX3-2P78367 333 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 NSUN6Q8TEA1 469 aaKnown RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 COPS5Q92905 334 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 PRDM5Q9NQX1 630 aaPredicted RBP12.36□□□□□ -0.43
SAFB2-202ENST00000585449 Q9Y3F1 56 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 CEP290O15078 2479 aa12.36□□□□□ -0.43
SAFB2-202ENST00000585449 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 B4DLN1 442 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 PQBP1O60828 265 aaKnown RBP12.35□□□□□ -0.43
SAFB2-202ENST00000585449 ARIH2O95376 493 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 KIF5BP33176 963 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 BMP8BP34820 402 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 HSPA4P34932 840 aa12.35□□□□□ -0.43
SAFB2-202ENST00000585449 HSD17B4P51659 736 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms