RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 A0A1W2PQJ5 194 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RCCD1A6NED2 376 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LRRIQ3A6PVS8 624 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 IPO7O95373 1038 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ASIC1P78348 528 aa15.86■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NAV1Q8NEY1 1877 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ANO9A1A5B4 782 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 FCER1AP12319 257 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MCM3P25205 808 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 GNA11P29992 359 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 AMPD3Q01432 767 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NEK8Q86SG6 692 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 FAM71BQ8TC56 605 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 VIPAS39Q9H9C1 493 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 C6orf50Q9HD87 102 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 FAN1Q9Y2M0 1017 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TARSL2A2RTX5 802 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SMCO2A6NFE2 343 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 GRIK5Q16478 980 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 HSP90B2PQ58FF3 399 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MMTAG2Q9BU76 263 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CPVLQ9H3G5 476 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ACBD3Q9H3P7 528 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 MED4Q9NPJ6 270 aa15.85■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RPS6KA4O75676 772 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CKAP4Q07065 602 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 RC3H1Q5TC82 1133 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CNNM4Q6P4Q7 775 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 IQCDQ96DY2 449 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ZPR1O75312 459 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ACTN2P35609 894 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 TECP42680 631 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 KIAA0895Q8NCT3 520 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 CCDC102AQ96A19 550 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 ANKIB1Q9P2G1 1089 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LEMD3Q9Y2U8 911 aa15.84■□□□□ 0.13
CDK5RAP3-237ENST00000585163 LDHCP07864 332 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SMARCA1P28370 1054 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 HNRNPH3P31942 346 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ORC2Q13416 577 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CENPPQ6IPU0 288 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MAPKAPK5Q8IW41 473 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PCMTD1Q96MG8 357 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SAP30BPQ9UHR5 308 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 NKRFO15226 690 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 VAV2P52735 878 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MAP9Q49MG5 647 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FKBP15Q5T1M5 1219 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RRP36Q96EU6 259 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CAPZA3Q96KX2 299 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 EYA3Q99504 573 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RTFDC1Q9BY42 306 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SEMA6BQ9H3T3 888 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PLAGL2Q9UPG8 496 aa15.83■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CDK8P49336 464 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CYP27A1Q02318 531 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 KIF5AQ12840 1032 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 NEDD1Q8NHV4 660 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TSGA10Q9BZW7 698 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZNF263O14978 683 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CERS3Q8IU89 383 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZBTB9Q96C00 473 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CCDC42Q96M95 316 aa15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SEC63Q9UGP8 760 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-237ENST00000585163 IDEP14735 1019 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CAPN2P17655 700 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SOGA3Q5TF21 947 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SV2BQ7L1I2 683 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 REXO1Q8N1G1 1221 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CWC15Q9P013 229 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CDK5RAP2Q96SN8 1893 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MACROD2A1Z1Q3 448 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PDE2AO00408 941 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SPA17Q15506 151 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZNF804AQ7Z570 1209 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SLC51AQ86UW1 340 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MTMR9Q96QG7 549 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms