RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 CHST3Q7LGC8 479 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 STAG2Q8N3U4 1231 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 ASTN1O14525 1302 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 ELP1O95163 1332 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
SS18-225ENST00000585121 DCDC2CA8MYV0 355 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 DYNC1LI2O43237 492 aaPredicted RBP14.4□□□□□ -0.1
SS18-225ENST00000585121 ADCY6O43306 1168 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 ASGR1P07306 291 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 MCM5P33992 734 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 RNF20Q5VTR2 975 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 CCSAPQ6IQ19 270 aaPredicted RBP14.4□□□□□ -0.1
SS18-225ENST00000585121 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 STOX1Q6ZVD7 989 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 MB21D2Q8IYB1 491 aaPredicted RBP14.4□□□□□ -0.1
SS18-225ENST00000585121 TMTC2Q8N394 836 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 MTA3Q9BTC8 594 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 Q9Y3F1 56 aa14.4□□□□□ -0.1
SS18-225ENST00000585121 PALM3A6NDB9 673 aaPredicted RBP14.39□□□□□ -0.11
SS18-225ENST00000585121 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 SLC27A2O14975 620 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 ZBTB5O15062 677 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
SS18-225ENST00000585121 CABYRO75952 493 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 SMPD1P17405 629 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 GRM4Q14833 912 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 CREB3L3Q68CJ9 461 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 TDHQ8IZJ6 230 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 PDGFCQ9NRA1 345 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 GNEQ9Y223 722 aaKnown RBP14.39□□□□□ -0.11
SS18-225ENST00000585121 TAF6LQ9Y6J9 622 aa14.39□□□□□ -0.11
SS18-225ENST00000585121 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
SS18-225ENST00000585121 MROH7Q68CQ1 1323 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
SS18-225ENST00000585121 PRC1O43663 620 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 CDC45O75419 566 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 CLTBP09497 229 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 KIF5BP33176 963 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 NKX3-2P78367 333 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
SS18-225ENST00000585121 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
SS18-225ENST00000585121 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 CTCFLQ8NI51 663 aaPredicted RBP14.38□□□□□ -0.11
SS18-225ENST00000585121 IGDCC4Q8TDY8 1250 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 NSUN6Q8TEA1 469 aaKnown RBP14.38□□□□□ -0.11
SS18-225ENST00000585121 TMEM87BQ96K49 555 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 TMEM39AQ9NV64 488 aa14.38□□□□□ -0.11
SS18-225ENST00000585121 CCDC69A6NI79 296 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.11
SS18-225ENST00000585121 ANTXR2P58335 489 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 BEX3Q00994 111 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 TROAPQ12815 778 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 ANKRD33Q7Z3H0 272 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
SS18-225ENST00000585121 IWS1Q96ST2 819 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
SS18-225ENST00000585121 RBM47A0AV96 593 aaKnown RBP14.36□□□□□ -0.11
SS18-225ENST00000585121 ARVCFO00192 962 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
SS18-225ENST00000585121 DDAH1O94760 285 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 CFBP00751 764 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 RAG1P15918 1043 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 EDNRBP24530 442 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
SS18-225ENST00000585121 PPP2R5BQ15173 497 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 SCFD2Q8WU76 684 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 MTMR8Q96EF0 704 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 RMDN3Q96TC7 470 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 MAP3K14Q99558 947 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 RIOX1Q9H6W3 641 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 LY9Q9HBG7 655 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
SS18-225ENST00000585121 MCM3APO60318 1980 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 GNAQP50148 359 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 CPT1AP50416 773 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 STXBP2Q15833 593 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 OR6J1Q8NGC5 347 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 BADQ92934 168 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
SS18-225ENST00000585121 PIGSQ96S52 555 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms