RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 UBA5Q9GZZ9 404 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 WDR19Q8NEZ3 1342 aa23.94■■□□□ 1.42
TOP3A-219ENST00000584887 CABYRO75952 493 aa23.94■■□□□ 1.42
TOP3A-219ENST00000584887 MORC4Q8TE76 937 aa23.94■■□□□ 1.42
TOP3A-219ENST00000584887 CTNNA3Q9UI47 895 aa23.94■■□□□ 1.42
TOP3A-219ENST00000584887 RPS6P62753 249 aaKnown RBP23.93■■□□□ 1.42
TOP3A-219ENST00000584887 PDE4DQ08499 809 aa23.93■■□□□ 1.42
TOP3A-219ENST00000584887 PPIGQ13427 754 aaKnown RBP eCLIP23.93■■□□□ 1.427e-7■■■■□ 26.5
TOP3A-219ENST00000584887 MFSD5Q6N075 450 aa23.93■■□□□ 1.42
TOP3A-219ENST00000584887 ZSCAN10Q96SZ4 725 aaPredicted RBP23.93■■□□□ 1.42
TOP3A-219ENST00000584887 WDR11Q9BZH6 1224 aa23.93■■□□□ 1.42
TOP3A-219ENST00000584887 DHX16O60231 1041 aaKnown RBP23.92■■□□□ 1.42
TOP3A-219ENST00000584887 PSMC6P62333 389 aa23.92■■□□□ 1.42
TOP3A-219ENST00000584887 ITGA7Q13683 1181 aa23.92■■□□□ 1.42
TOP3A-219ENST00000584887 CDC37Q16543 378 aaPredicted RBP23.92■■□□□ 1.42
TOP3A-219ENST00000584887 MPHOSPH6Q99547 160 aaKnown RBP23.92■■□□□ 1.42
TOP3A-219ENST00000584887 UBAC1Q9BSL1 405 aa23.92■■□□□ 1.42
TOP3A-219ENST00000584887 Q9Y3F1 56 aa23.92■■□□□ 1.42
TOP3A-219ENST00000584887 CSF2RAP15509 400 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 CYP2C18P33260 490 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 IRX6P78412 446 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-219ENST00000584887 DUSP28Q4G0W2 176 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 TMEM199Q8N511 208 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 ENAHQ8N8S7 591 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-219ENST00000584887 CDX2Q99626 313 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-219ENST00000584887 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.428e-8■■■■□ 21.2
TOP3A-219ENST00000584887 KRT23Q9C075 422 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 SEMA6BQ9H3T3 888 aa23.91■■□□□ 1.42
TOP3A-219ENST00000584887 TNKSO95271 1327 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 DLL1O00548 723 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 ACRP10323 421 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 PDE4AP27815 886 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 NT5C2P49902 561 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 OR6J1Q8NGC5 347 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 ZSWIM5Q9P217 1185 aa23.9■■□□□ 1.42
TOP3A-219ENST00000584887 LOC102724159A0A0B4J2E5 919 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 CD4P01730 458 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 MYL3P08590 195 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 PWP2Q15269 919 aaKnown RBP23.89■■□□□ 1.41
TOP3A-219ENST00000584887 ASPRV1Q53RT3 343 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 TTC22Q5TAA0 569 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 SLC43A3Q8NBI5 491 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 TRPV6Q9H1D0 765 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 IL25Q9H293 177 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 TTYH1Q9H313 450 aaPredicted RBP23.89■■□□□ 1.41
TOP3A-219ENST00000584887 HIPK3Q9H422 1215 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 CNNM2Q9H8M5 875 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 COL6A3P12111 3177 aa23.89■■□□□ 1.41
TOP3A-219ENST00000584887 GRIN2DO15399 1336 aa23.88■■□□□ 1.41
TOP3A-219ENST00000584887 PARP1P09874 1014 aaKnown RBP23.88■■□□□ 1.41
TOP3A-219ENST00000584887 GSPT1P15170 499 aaKnown RBP23.88■■□□□ 1.41
TOP3A-219ENST00000584887 PPP2R5BQ15173 497 aa23.88■■□□□ 1.41
TOP3A-219ENST00000584887 ADGRF4Q8IZF3 695 aa23.88■■□□□ 1.41
TOP3A-219ENST00000584887 ANKS1AQ92625 1134 aa23.88■■□□□ 1.41
TOP3A-219ENST00000584887 VAT1LQ9HCJ6 419 aa23.88■■□□□ 1.41
TOP3A-219ENST00000584887 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.87■■□□□ 1.41
TOP3A-219ENST00000584887 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.87■■□□□ 1.41
TOP3A-219ENST00000584887 B4DLN1 442 aa23.87■■□□□ 1.41
TOP3A-219ENST00000584887 MRPL12P52815 198 aaKnown RBP23.87■■□□□ 1.41
TOP3A-219ENST00000584887 TMEM240Q5SV17 173 aa23.87■■□□□ 1.41
TOP3A-219ENST00000584887 DNERQ8NFT8 737 aa23.87■■□□□ 1.41
TOP3A-219ENST00000584887 MYLIPQ8WY64 445 aa23.87■■□□□ 1.41
TOP3A-219ENST00000584887 GPHNQ9NQX3 736 aaPredicted RBP23.87■■□□□ 1.41
TOP3A-219ENST00000584887 POLR3EQ9NVU0 708 aa23.87■■□□□ 1.41
TOP3A-219ENST00000584887 ABCB11O95342 1321 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 UMODL1Q5DID0 1318 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 B4GALT4O60513 344 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 CPT1AP50416 773 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 QRICH1Q2TAL8 776 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 BRDTQ58F21 947 aaPredicted RBP23.86■■□□□ 1.41
TOP3A-219ENST00000584887 IFIT1BQ5T764 474 aaKnown RBP23.86■■□□□ 1.41
TOP3A-219ENST00000584887 PSRC1Q6PGN9 363 aaPredicted RBP23.86■■□□□ 1.41
TOP3A-219ENST00000584887 ZNF365Q70YC5 407 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 C16orf59Q7L2K0 433 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 SCFD2Q8WU76 684 aa23.86■■□□□ 1.41
TOP3A-219ENST00000584887 RAD50Q92878 1312 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 RBM47A0AV96 593 aaKnown RBP23.85■■□□□ 1.41
TOP3A-219ENST00000584887 EDNRBP24530 442 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 DNAJB2P25686 324 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 CCL23P55773 120 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 COPS5Q92905 334 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 SEZ6LQ9BYH1 1024 aa23.85■■□□□ 1.41
TOP3A-219ENST00000584887 LAMA2P24043 3122 aaKnown RBP23.85■■□□□ 1.41
TOP3A-219ENST00000584887 TXNP10599 105 aaKnown RBP23.84■■□□□ 1.41
TOP3A-219ENST00000584887 FAM47CQ5HY64 1035 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 FBXO11Q86XK2 927 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 RUFY2Q8WXA3 655 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 TBC1D5Q92609 795 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 MTG1Q9BT17 334 aaPredicted RBP23.84■■□□□ 1.41
TOP3A-219ENST00000584887 NOC4LQ9BVI4 516 aaKnown RBP23.84■■□□□ 1.41
TOP3A-219ENST00000584887 ALDH8A1Q9H2A2 487 aaPredicted RBP23.84■■□□□ 1.41
TOP3A-219ENST00000584887 IL23AQ9NPF7 189 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 CUL9Q8IWT3 2517 aa23.84■■□□□ 1.41
TOP3A-219ENST00000584887 NKRFO15226 690 aaKnown RBP eCLIP23.83■■□□□ 1.41
TOP3A-219ENST00000584887 FOSL2P15408 326 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 CHMP4BP1P59074 171 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 PURAQ00577 322 aaKnown RBP23.83■■□□□ 1.41
TOP3A-219ENST00000584887 TRDNQ13061 729 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 CYB5R4Q7L1T6 521 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 RGS22Q8NE09 1264 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms