RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
CDK5RAP3-231ENST00000584063 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
CDK5RAP3-231ENST00000584063 SAP30BPQ9UHR5 308 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-231ENST00000584063 N4BP1O75113 896 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 FUT2Q10981 343 aa12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 DPYDQ12882 1025 aa12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 KCND1Q9NSA2 647 aa12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
CDK5RAP3-231ENST00000584063 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SRGNP10124 158 aa12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GUCY2CP25092 1073 aa12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZSCAN26Q16670 478 aa12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIM10Q9UDY6 481 aa12.96□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TNRC6CQ9HCJ0 1690 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 EFCAB8A8MWE9 144 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NEK9Q8TD19 979 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ESR2Q92731 530 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RSPH14Q9UHP6 348 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CTNND2Q9UQB3 1225 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CHD4Q14839 1912 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 hCG_2014768A0A024R1R8 64 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 H3BQF6 201 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CCP110O43303 1012 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FXR1P51114 621 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NPY5RQ15761 445 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MAPKAPK5Q8IW41 473 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TGFBRAP1Q8WUH2 860 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLX1AQ9BQ83 275 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MRFAP1Q9Y605 127 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SEMA3EO15041 775 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 HOXA2O43364 376 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 LMAN1P49257 510 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TROAPQ12815 778 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MORC3Q14149 939 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SH3RF3Q8TEJ3 882 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FOXP1Q9H334 677 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 AKR1B15C9JRZ8 316 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CCDC175P0C221 793 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZNF18P17022 549 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 CYP2C19P33261 490 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 AKAP17AQ02040 695 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PNKPQ96T60 521 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TAB2Q9NYJ8 693 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
CDK5RAP3-231ENST00000584063 LAMB2P55268 1798 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ENC1O14682 589 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SCNN1DP51172 638 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 KCNQ5Q9NR82 932 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SRPRBQ9Y5M8 271 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 H0YIN7 160 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 STX10O60499 249 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 PICALMQ13492 652 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 NR1I3Q14994 352 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 IL17AQ16552 155 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 MAP9Q49MG5 647 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ARMC3Q5W041 872 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
CDK5RAP3-231ENST00000584063 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms