RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 ITGA7Q13683 1181 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 BAATQ14032 418 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IQSEC1Q6DN90 963 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 BTNL9Q6UXG8 535 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CHD1LQ86WJ1 897 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SMC5Q8IY18 1101 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MAFAQ8NHW3 353 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TTC14Q96N46 770 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ZKSCAN3Q9BRR0 538 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SEZ6LQ9BYH1 1024 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TTYH1Q9H313 450 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SEMA6BQ9H3T3 888 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 HIPK3Q9H422 1215 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PDGFCQ9NRA1 345 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 Q9Y3F1 56 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MYH6P13533 1939 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 UNC80Q8N2C7 3258 aa10.22□□□□□ -0.77
CDK5RAP3-229ENST00000583697 B4DLN1 442 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MRPL12P52815 198 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PDE4DQ08499 809 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PPP2R5BQ15173 497 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IMMTQ16891 758 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 USH1GQ495M9 461 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CCDC178Q5BJE1 867 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 OR6J1Q8NGC5 347 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TIFAQ96CG3 184 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PURBQ96QR8 312 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 KAT14Q9H8E8 782 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
CDK5RAP3-229ENST00000583697 B4GALT4O60513 344 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CD4P01730 458 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 SNHG28P0DPA3 235 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PTGS1P23219 599 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PSMC6P62333 389 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 RPS6P62753 249 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 DGKHQ86XP1 1220 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 DNERQ8NFT8 737 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 MORC4Q8TE76 937 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 WDR11Q9BZH6 1224 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 OSBPL3Q9H4L5 887 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 IL23AQ9NPF7 189 aa10.2□□□□□ -0.78
CDK5RAP3-229ENST00000583697 TNKSO95271 1327 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ABCB11O95342 1321 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 B4E1Z4 1266 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 NKRFO15226 690 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 KDM4AO75164 1064 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 MYL3P08590 195 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 GOLGA8HP0CJ92 632 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ACRP10323 421 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CYP2C18P33260 490 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CCL23P55773 120 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 NUCB1Q02818 461 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 RAB30Q15771 203 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CDC37Q16543 378 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ASPRV1Q53RT3 343 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 FAM47CQ5HY64 1035 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 TMEM240Q5SV17 173 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ERICH6BQ5W0A0 696 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PLEKHM2Q8IWE5 1019 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 SCFD2Q8WU76 684 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CLEC4DQ8WXI8 215 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 GAS2L1Q99501 681 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 UBAC1Q9BSL1 405 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 MTG1Q9BT17 334 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 DSCC1Q9BVC3 393 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ZNF576Q9H609 170 aa10.19□□□□□ -0.78
CDK5RAP3-229ENST00000583697 UMODL1Q5DID0 1318 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 SUPT20HL2P0C7V6 817 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PURAQ00577 322 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 TMEM63BQ5T3F8 832 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ZNF365Q70YC5 407 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PBX4Q9BYU1 374 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 KRT23Q9C075 422 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CNNM2Q9H8M5 875 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 CTNNA3Q9UI47 895 aa10.18□□□□□ -0.78
CDK5RAP3-229ENST00000583697 GRIN2DO15399 1336 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 RBM47A0AV96 593 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 IGHDP01880 384 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 FGBP02675 491 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PFKMP08237 780 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 PARP1P09874 1014 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 TXNP10599 105 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 EDNRBP24530 442 aa10.17□□□□□ -0.78
CDK5RAP3-229ENST00000583697 TTLL4Q14679 1199 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms